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Overhaul MAE #17

Merged
merged 25 commits into from
Jan 3, 2024
Merged

Overhaul MAE #17

merged 25 commits into from
Jan 3, 2024

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jkanche
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@jkanche jkanche commented Jan 2, 2024

  • Migrate to functional style to access properties and attributes
  • column_data and sample_map are expected to be BiocFrame objects and will be converted if a pandas DataFrame is provided. This will allows us to reduce complexity and provide consistent downstream operations.
  • A sample_map will be created by default if both column_data and sample_map are None.
  • A warning is raised if column_names are empty for an experiment.
  • Streamlines subset operation.
  • Reduce dependency on a number of external packages.
  • Update docstrings, tests and docs.

jkanche and others added 25 commits January 2, 2024 14:50
@jkanche jkanche merged commit a59dd9a into master Jan 3, 2024
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@jkanche jkanche deleted the overhaul-mae branch January 3, 2024 21:10
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