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SegArray optimization & bug fix #3021

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Mar 11, 2024
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13 changes: 11 additions & 2 deletions arkouda/join.py
Original file line number Diff line number Diff line change
Expand Up @@ -117,7 +117,7 @@ def join_on_eq_with_dt(
return resI, resJ


def gen_ranges(starts, ends, stride=1):
def gen_ranges(starts, ends, stride=1, return_lengths=False):
"""
Generate a segmented array of variable-length, contiguous ranges between pairs of
start- and end-points.
Expand All @@ -130,13 +130,17 @@ def gen_ranges(starts, ends, stride=1):
The end value (exclusive) of each range
stride: int
Difference between successive elements of each range
return_lengths: bool, optional
Whether or not to return the lengths of each segment. Default False.

Returns
-------
segments : pdarray, int64
The starting index of each range in the resulting array
ranges : pdarray, int64
The actual ranges, flattened into a single array
lengths : pdarray, int64
The lengths of each segment. Only returned if return_lengths=True.
"""
if starts.size != ends.size:
raise ValueError("starts and ends must be same length")
Expand All @@ -158,7 +162,12 @@ def gen_ranges(starts, ends, stride=1):
)
)
slices[segs[non_empty]] = diffs
return segs, cumsum(slices)

sums = cumsum(slices)
if return_lengths:
return segs, sums, lengths
else:
return segs, sums


@typechecked
Expand Down
6 changes: 3 additions & 3 deletions arkouda/segarray.py
Original file line number Diff line number Diff line change
Expand Up @@ -96,7 +96,7 @@ def __init__(self, segments, values, lengths=None, grouping=None):
self.lengths = lengths

self._non_empty = self.lengths > 0
self._non_empty_count = self.non_empty.sum()
self._non_empty_count = self._non_empty.sum()

# grouping object computation. (This will need to be moved to the server)
# GroupBy computation left here because of lack of server obj. May need to move in Future
Expand Down Expand Up @@ -228,8 +228,8 @@ def __getitem__(self, i):
elif (isinstance(i, pdarray) and i.dtype in [akint64, akuint64, akbool]) or isinstance(i, slice):
starts = self.segments[i]
ends = starts + self.lengths[i]
newsegs, inds = gen_ranges(starts, ends)
return SegArray(newsegs, self.values[inds])
newsegs, inds, lengths = gen_ranges(starts, ends, return_lengths=True)
return SegArray(newsegs, self.values[inds], lengths)
else:
raise TypeError(f"Invalid index type: {type(i)}")

Expand Down
1 change: 0 additions & 1 deletion benchmarks/dataframe.py
Original file line number Diff line number Diff line change
Expand Up @@ -53,7 +53,6 @@ def time_ak_df_display(N_per_locale, trials, seed):
timings = {op: [] for op in OPS}
results = {}
for i in range(trials):
timings = {op: [] for op in OPS}
for op in timings.keys():
fxn = getattr(df, op)
start = time.time()
Expand Down
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