Code

Dev#26

Code

Merged

bfrosik merged 87 commits intomainAdvancedPhotonSource/cohere:mainfrom DevAdvancedPhotonSource/cohere:DevCopy head branch name to clipboardMay 2, 2024

+3,542-2,008

Commits

Commits on Jun 28, 2023

• Strain from CoupledRec (#16)

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  jacione

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  bfrosik

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Commits on Jul 6, 2023

• fixed interface issue with cohere-ui after merge

  bfrosik

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• fixed interface issue after merge

  

  Barbara Frosik

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Commits on Jul 11, 2023

• Merge branch 'Dev' of https://github.com/advancedPhotonSource/cohere into Dev

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  bfrosik

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• Delete reconstruction_GA_HPC.py

  bfrosik

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• moved cleaning memory to lib

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Commits on Jul 12, 2023

• Delete reconstruction_HPC_GA.py

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  2b2963d

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• fixed problrm with parameter

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• fixed imoprt name

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Commits on Jul 18, 2023

• fixed docs for developers

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Commits on Aug 1, 2023

• supressed warnings in verifier when parsing device

  bfrosik

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Commits on Aug 28, 2023

• fixed crop issue in ui

  bfrosik

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Commits on Oct 6, 2023

• Autodata (#18)

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  pfrosik

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  bfrosik

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Commits on Oct 13, 2023

• added debug option

  bfrosik

  committed
  a880732

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Commits on Oct 16, 2023

• moved utils from cohere-ui to cohere core and cleane up

  bfrosik

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• merging

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Commits on Oct 19, 2023

• cleaned up utils

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Commits on Nov 3, 2023

• support for auto data for separate scan ranges

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• aligned with cohere-ui

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• align with cohere-ui

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Commits on Nov 9, 2023

• relaxed verifier for auto data

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• relaxed verifier

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• aligning with ui

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Commits on Nov 10, 2023

• added missing save_dir in reconstruction scripts

  bfrosik

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Commits on Nov 14, 2023

• added for hpc

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Commits on Nov 27, 2023

• sync with cohere-ui module

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Commits on Nov 30, 2023

• removed warning

  bfrosik

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  c11beae

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Commits on Dec 8, 2023

• added cluster capability

  jacione

  committed
  4ad62f5

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• removed print statements

  jacione

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Commits on Dec 20, 2023

• cleaned up, bug fixes

  jacione

  committed
  51107cf

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Commits on Jan 2, 2024

• added description for cluster, fixed host naming issue

  bfrosik

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Commits on Jan 3, 2024

• fixed typo

  bfrosik

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  107ba81

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update README.md

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• Update README.md

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• Update README.md

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Commits on Jan 4, 2024

• fixed verifier, aligned cohere-ui

  bfrosik

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Commits on Jan 5, 2024

• aligned with cohere-ui module

  bfrosik

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Commits on Jan 19, 2024

• formatted text, fixed verifier for multipeak

  bfrosik

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Commits on Jan 22, 2024

• blocked auto binning for mp and aligned ui

  bfrosik

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Commits on Jan 25, 2024

• return correlation error in addition to aligned array

  bfrosik

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• aligned ui

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• aligned with cohere-ui

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Commits on Jan 26, 2024

• added description in verifier, aligned with ui

  bfrosik

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Commits on Jan 30, 2024

• Updated multipeak capabilities (Dev) (#22)

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  jacione

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  bfrosik

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  3e52924

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• aligned with ui

  bfrosik

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Commits on Feb 6, 2024

• updated torch lib

  bfrosik

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Commits on Feb 8, 2024

• fixed torchlib

  bfrosik

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  b795329

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• removed unused function, aligned ui

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Commits on Feb 13, 2024

• synch ui

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Commits on Mar 6, 2024

• revised fftconvolve function

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Commits on Mar 15, 2024

• added comments to op flow, and simplified

  bfrosik

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  a9d603e

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• modified get_ratio

  bfrosik

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• removed defaults in cohere-core, added checks for misconfiguration

  bfrosik

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Commits on Mar 19, 2024

• added error checks and prints of error messages if fail

  bfrosik

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Commits on Mar 20, 2024

• removed code to activate lpf at last iteration

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• aligned with cohere-ui

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• added tqdm package in setup.py

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Commits on Mar 21, 2024

• added example of different sw type in features

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• moved checks based on type

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Commits on Mar 27, 2024

• change definition of algorithms dict to include to_direct and to_reciprocal

  bfrosik

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Commits on Apr 2, 2024

• refactored cluster handling

  jacione

  committed
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Commits on Apr 3, 2024

• changed API to receive hostfile instead of arbitrary naming it

  jacione

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Commits on Apr 5, 2024

• changed api

  bfrosik

  committed
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Commits on Apr 8, 2024

• Removed Support class and moved support array to Rec

  bfrosik

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Commits on Apr 9, 2024

• renamed phase modulus to phase constrain

  bfrosik

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• change description, slightly modified code

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Commits on Apr 12, 2024

• updated documentation

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• corrected docs

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Commits on Apr 15, 2024

• modified for new release

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• modified to do beta buid

  bfrosik

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Commits on Apr 23, 2024

• refactored to set defaults through get, corrected decs

  bfrosik

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• modified doc conf.py

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• modified doc conf.py

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• updated docs

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• cleaned up docs

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• aligning with cohere-ui

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Commits on Apr 24, 2024

• merging main in Dev

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Commits on Apr 29, 2024

• fixed naming

  bfrosik

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  192ebde

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Commits on May 1, 2024

• fixed library issue for mac

  bfrosik

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  0f279f9

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Commits on May 2, 2024

• modified shift_phase, changed import

  bfrosik

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  4e799a5

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• modified for new build

  bfrosik

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  7e7aac1

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• modified doc

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