Release v0.3.1rc1

Dockerfile

@@ -42,7 +42,7 @@ RUN make dist
 FROM cebra-base
 
 # install the cebra wheel
-ENV WHEEL=cebra-0.3.0-py2.py3-none-any.whl
+ENV WHEEL=cebra-0.3.1rc1-py2.py3-none-any.whl
 WORKDIR /build
 COPY --from=wheel /build/dist/${WHEEL} .
 RUN pip install --no-cache-dir ${WHEEL}'[dev,integrations,datasets]'

Makefile

@@ -1,4 +1,4 @@
-CEBRA_VERSION=$(shell python3 -c "import cebra; print(cebra.__version__)")
+CEBRA_VERSION := 0.3.1rc1
 
 dist:
 	python3 -m pip install virtualenv
@@ -10,7 +10,7 @@ build: dist
 archlinux:
 	mkdir -p dist/arch
 	cp PKGBUILD dist/arch
-	cp dist/cebra-0.3.0.tar.gz dist/arch
+	cp dist/cebra-${CEBRA_VERSION}.tar.gz dist/arch
 	(cd dist/arch; makepkg --skipchecksums -f)
 
 # NOTE(stes): Ensure that no old tempfiles are present. Ideally, move this into

PKGBUILD

@@ -1,7 +1,7 @@
 # Maintainer: Steffen Schneider <[email protected]>
 pkgname=python-cebra
 _pkgname=cebra
-pkgver=0.3.0
+pkgver=0.3.1rc1
 pkgrel=1
 pkgdesc="Consistent Embeddings of high-dimensional Recordings using Auxiliary variables"
 url="https://cebra.ai"

README.md

@@ -45,5 +45,6 @@ It can jointly use behavioral and neural data in a hypothesis- or discovery-driv
   [Learnable latent embeddings for joint behavioral and neural analysis.](https://arxiv.org/abs/2204.00673)
   Steffen Schneider*, Jin Hwa Lee* and Mackenzie Weygandt Mathis
 
- # License
+# License
+
 -  CEBRA is released for academic use only (please read the license file). If this license is not appropriate for your application, please contact Prof. Mackenzie W. Mathis ([email protected]) for a commercial use license.

cebra/__init__.py

@@ -56,7 +56,7 @@
 
 import cebra.integrations.sklearn as sklearn
 
-__version__ = "0.3.0"
+__version__ = "0.3.1rc1"
 __all__ = ["CEBRA"]
 __allow_lazy_imports = False
 __lazy_imports = {}

reinstall.sh

@@ -15,7 +15,7 @@ pip uninstall -y cebra
 # Get version info after uninstalling --- this will automatically get the
 # most recent version based on the source code in the current directory.
 # $(tools/get_cebra_version.sh)
-VERSION=0.3.0
+VERSION=0.3.1rc1
 echo "Upgrading to CEBRA v${VERSION}"
 
 # Upgrade the build system (PEP517/518 compatible)

tools/bump_version.sh

@@ -0,0 +1,33 @@
+#!/bin/bash
+# Bump the CEBRA version to the specified value.
+# Edits all relevant files at once.
+# 
+# Usage:
+# tools/bump_version.sh 0.3.1rc1
+
+version=$1
+if [ -z ${version} ]; then
+    >&1 echo "Specify a version number."
+    >&1 echo "Usage:"
+    >&1 echo "tools/bump_version.sh <semantic version>"
+fi
+
+# python cebra version
+sed -i "s/__version__ = .*/__version__ = \"${version}\"/" \
+    cebra/__init__.py
+
+# reinstall script in root
+sed -i "s/VERSION=.*/VERSION=${version}/" \
+    reinstall.sh
+
+# Makefile
+sed -i "s/CEBRA_VERSION := .*/CEBRA_VERSION := ${version}/" \
+    Makefile
+
+# Arch linux PKGBUILD 
+sed -i "s/pkgver=.*/pkgver=${version}/" \
+    PKGBUILD 
+
+# Dockerfile
+sed -i "s/ENV WHEEL=cebra-.*\.whl/ENV WHEEL=cebra-${version}-py2.py3-none-any.whl/" \
+    Dockerfile