Small fix and refine documents

[udzura]

• Change clone URL. Repository URLs with '[email protected]:...' seems to be for developers, who must have privileges to the youki repo.
• Fix invalid link in basic usage 🙏

[YJDoc2]

Thank you for fixing the link! Can I ask you to also update the url for runtime-tools to https as well?
Also git@... urls are not only for youki devs, but might fail is ssh keys of the user are not properly setup. We should change it to https anyways, might be helpful for others

[utam0k]

Thanks for your first contribution!

[udzura]

@YJDoc2 Thanks for the review! Did you expect commit 463cdc4 ?

[codecov-commenter]

Codecov Report

Merging #1351 (463cdc4) into main (69b2cb3) will not change coverage.
The diff coverage is n/a.

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1351   +/-   ##
=======================================
  Coverage   68.80%   68.80%           
=======================================
  Files         119      119           
  Lines       12586    12586           
=======================================
  Hits         8660     8660           
  Misses       3926     3926           

[YJDoc2]

lgtm 👍

[YJDoc2]

Thank you for your contribution :)