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v0.2.8, minor updates
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ygidtu committed Jul 19, 2023
1 parent 4cd3689 commit 855b2f0
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4 changes: 3 additions & 1 deletion README.md
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Expand Up @@ -326,7 +326,7 @@ And a more detailed tutorial could be found at [here.](https://trackplot.readthe

```bash
# example of basic plot types
python main.py \
python ../main.py \
-e chr1:1270656-1284730:+ \
-r example/example.sorted.gtf.gz \
--interval example/interval_list.tsv \
Expand All @@ -345,6 +345,7 @@ python main.py \
--barcode example/barcode_list.tsv \
--domain --remove-duplicate-umi \
--normalize-format cpm \
--annotation-scale .3 \
-p 4
```

Expand Down Expand Up @@ -377,6 +378,7 @@ docker run -v $PWD:$PWD --rm ygidtu/trackplot \
--barcode $PWD/example/barcode_list.tsv \
--domain --remove-duplicate-umi \
--normalize-format cpm \
--annotation-scale .3 \
-p 4

```
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2 changes: 1 addition & 1 deletion cmdAppImageBuilder.yml
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Expand Up @@ -11,7 +11,7 @@ AppDir:
app_info:
id: org.appimage-crafters.trackplot
name: trackplot
version: 0.2.7
version: 0.2.8
# Set the python executable as entry point
exec: "bin/python3"
# Set the application main script path as argument. Use '$@' to forward CLI parameters
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6 changes: 4 additions & 2 deletions main.py
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Expand Up @@ -9,5 +9,7 @@


if __name__ == "__main__":
main()

try:
main()
except Exception as err:
logger.exception(err)
2 changes: 1 addition & 1 deletion pyproject.toml
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@@ -1,6 +1,6 @@
[tool.poetry]
name = "trackplot"
version = "0.2.7"
version = "0.2.8"
description = "The trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and full-length sequencing datasets. https://sashimi.readthedocs.io/"
authors = ["ygidtu <[email protected]>"]
license = "BSD-3"
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