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@xjtu-omics

xjtu-omics

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  1. SVision SVision Public

    Detecting genome structural variants with deep learning in single molecule sequencing

    Python 102 10

  2. ChineseQuartetGenome ChineseQuartetGenome Public

    Genome assembly and variant benchmarks for Chinese Quartet

    Python 3

  3. msisensor-pro msisensor-pro Public

    Microsatellite Instability (MSI) detection using high-throughput sequencing data.

    C++ 104 23

  4. Papaver-Genomics Papaver-Genomics Public

    The genomic data for Papaver species

    Visual Basic 6.0 3 5

  5. msisensor-rna msisensor-rna Public

    MSIsensor-RNA: Microsatellite instability detection using RNA sequencing data

    Python 20 2

  6. D2 D2 Public

    D2: Compute DNA Density and Distance to nuclear periphery.

    Python

Repositories

Showing 10 of 45 repositories
  • STMiner Public

    Build the relationship between SVGs

    xjtu-omics/STMiner’s past year of commit activity
    Python 12 GPL-3.0 3 0 0 Updated Jan 3, 2025
  • SVision Public

    Detecting genome structural variants with deep learning in single molecule sequencing

    xjtu-omics/SVision’s past year of commit activity
    Python 102 GPL-3.0 10 17 0 Updated Dec 28, 2024
  • SVision-pro Public
    xjtu-omics/SVision-pro’s past year of commit activity
    0 0 0 0 Updated Dec 28, 2024
  • msisensor-pro Public

    Microsatellite Instability (MSI) detection using high-throughput sequencing data.

    xjtu-omics/msisensor-pro’s past year of commit activity
    C++ 104 23 4 (1 issue needs help) 0 Updated Nov 7, 2024
  • HiCAT-human Public Forked from Ian916/HiCAT-human

    HiCAT-human

    xjtu-omics/HiCAT-human’s past year of commit activity
    Python 0 1 0 0 Updated Oct 31, 2024
  • cluster Public

    instruction of Ye-Lab HPC

    xjtu-omics/cluster’s past year of commit activity
    1 1 0 0 Updated Sep 24, 2024
  • Papaver-Genomics Public

    The genomic data for Papaver species

    xjtu-omics/Papaver-Genomics’s past year of commit activity
    Visual Basic 6.0 3 5 0 0 Updated Aug 19, 2024
  • LTR_Stream Public
    xjtu-omics/LTR_Stream’s past year of commit activity
    Python 1 AGPL-3.0 0 0 0 Updated Jul 9, 2024
  • ChineseQuartetGenome Public

    Genome assembly and variant benchmarks for Chinese Quartet

    xjtu-omics/ChineseQuartetGenome’s past year of commit activity
    Python 3 MIT 0 0 0 Updated Jun 20, 2024
  • msisensor-rna Public

    MSIsensor-RNA: Microsatellite instability detection using RNA sequencing data

    xjtu-omics/msisensor-rna’s past year of commit activity
    Python 20 2 4 (1 issue needs help) 0 Updated Jun 20, 2024

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