Add adjacency tensor function (#664) #33
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| name: Test tutorials | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.13 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.13" | |
| - name: Install packages | |
| run: | | |
| sudo apt-get install -y rename | |
| python -m pip install --upgrade pip wheel setuptools | |
| python -m pip install -r requirements/default.txt -r requirements/test.txt -r requirements/tutorial.txt | |
| python -m pip install . | |
| python -m pip list | |
| - name: Prepare case studies notebooks | |
| run: | | |
| # go into tutorial location | |
| cd tutorials/case_studies | |
| # convert each notebook into a python file | |
| jupyter nbconvert --to script *.ipynb | |
| # rename the files so they are found by pytest: add 'test' at the beginning | |
| rename 's/(.*)\.py/test $1.py/' * | |
| # rename the files so they are found by pytest: change spaces to underscores | |
| rename 's/ /_/g' test* | |
| # modify each file by adding one level of indentation to each line | |
| sed -i 's/^/ /' test*.py | |
| # modify each file by adding 'def test_func():' at the top | |
| sed -i '1s;^;def test_func():\n;' test*.py | |
| - name: Prepare focus notebooks | |
| run: | | |
| # go into tutorial location | |
| cd tutorials/focus | |
| # convert each notebook into a python file | |
| jupyter nbconvert --to script *.ipynb | |
| # rename the files so they are found by pytest: add 'test' at the beginning | |
| rename 's/(.*)\.py/test $1.py/' * | |
| # rename the files so they are found by pytest: change spaces to underscores | |
| rename 's/ /_/g' test* | |
| # modify each file by adding one level of indentation to each line | |
| sed -i 's/^/ /' test*.py | |
| # modify each file by adding 'def test_func():' at the top | |
| sed -i '1s;^;def test_func():\n;' test*.py | |
| - name: Prepare getting started notebooks | |
| run: | | |
| # go into tutorial location | |
| cd tutorials/getting_started | |
| # convert each notebook into a python file | |
| jupyter nbconvert --to script *.ipynb | |
| # rename the files so they are found by pytest: add 'test' at the beginning | |
| rename 's/(.*)\.py/test $1.py/' * | |
| # rename the files so they are found by pytest: change spaces to underscores | |
| rename 's/ /_/g' test* | |
| # modify each file by adding one level of indentation to each line | |
| sed -i 's/^/ /' test*.py | |
| # modify each file by adding 'def test_func():' at the top | |
| sed -i '1s;^;def test_func():\n;' test*.py | |
| - name: Prepare in-depth notebooks | |
| run: | | |
| # go into tutorial location | |
| cd tutorials/in_depth | |
| # convert each notebook into a python file | |
| jupyter nbconvert --to script *.ipynb | |
| # rename the files so they are found by pytest: add 'test' at the beginning | |
| rename 's/(.*)\.py/test $1.py/' * | |
| # rename the files so they are found by pytest: change spaces to underscores | |
| rename 's/ /_/g' test* | |
| # modify each file by adding one level of indentation to each line | |
| sed -i 's/^/ /' test*.py | |
| # modify each file by adding 'def test_func():' at the top | |
| sed -i '1s;^;def test_func():\n;' test*.py | |
| - name: Test tutorial notebooks | |
| run: | | |
| # run pytest ONLY on the tutorials | |
| cd tutorials | |
| cd focus | |
| pytest --color=yes | |
| cd ../getting_started | |
| pytest --color=yes | |
| cd ../in_depth | |
| pytest --color=yes | |
| # removed this to speed up the tests | |
| # cd ../case_studies | |
| # pytest --color=yes |