Use threadpool for finding labels in chunk #327
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dcherian
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Great when we have lots of decent size chunks, particularly the NWM county groupby: 600ms -> 400ms. ``` | Before [0cccb90] <optimize-again> | After [38fe8a6c] <threadpool> | Ratio | Benchmark (Parameter) | |--------------------------------------|---------------------------------|---------|---------------------------------------------| | 3.50±0.2ms | 2.93±0.07ms | 0.84 | cohorts.PerfectMonthly.time_graph_construct | | 20.0±1ms | 9.66±1ms | 0.48 | cohorts.NWMMidwest.time_find_group_cohorts | ```
This reverts commit c6b93367e2024e60d77af24a69d177670a040dfc.
dcherian
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* main: (64 commits) import `normalize_axis_index` from `numpy.lib` on `numpy>=2` (#364) Optimize `min_count` when `expected_groups` is not provided. (#236) Use threadpool for finding labels in chunk (#327) Manually fuse reindexing intermediates with blockwise reduction for cohorts. (#300) Bump codecov/codecov-action from 4.1.1 to 4.3.1 (#362) Add cubed notebook for hourly climatology example using "map-reduce" method (#356) Optimize bitmask finding for chunk size 1 and single chunk cases (#360) Edits to climatology doc (#361) Fix benchmarks (#358) Trim CI (#355) [pre-commit.ci] pre-commit autoupdate (#350) Initial minimal working Cubed example for "map-reduce" (#352) Bump codecov/codecov-action from 4.1.0 to 4.1.1 (#349) `method` heuristics: Avoid dot product as much as possible (#347) Fix nanlen with strings (#344) Fix direct quantile reduction (#343) Fix upstream-dev CI, silence warnings (#341) Bump codecov/codecov-action from 4.0.0 to 4.1.0 (#338) Fix direct reductions of Xarray objects (#339) Test with py3.12 (#336) ...
dcherian
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Jun 30, 2024
* main: Bump codecov/codecov-action from 4.3.1 to 4.4.1 (#366) Cubed blockwise (#357) Remove errant print statement import `normalize_axis_index` from `numpy.lib` on `numpy>=2` (#364) Optimize `min_count` when `expected_groups` is not provided. (#236) Use threadpool for finding labels in chunk (#327) Manually fuse reindexing intermediates with blockwise reduction for cohorts. (#300) Bump codecov/codecov-action from 4.1.1 to 4.3.1 (#362) Add cubed notebook for hourly climatology example using "map-reduce" method (#356) Optimize bitmask finding for chunk size 1 and single chunk cases (#360) Edits to climatology doc (#361) Fix benchmarks (#358)
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Great when we have lots of decent size chunks, particularly the NWM county groupby: 600ms -> 400ms.