Merge pull request #161 from wustl-oncology/gatherbam_disk

increase disk space needed calc for bqsr-gatherbams step
wustl-oncology · Oct 9, 2024 · d3156af · d3156af
2 parents 7621601 + 0ae70ce
commit d3156af
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/definitions/tools/bqsr.wdl b/definitions/tools/bqsr.wdl
@@ -254,7 +254,7 @@ task GatherBamFiles {
     Int preemptible_tries
   }
   Int command_mem_gb = ceil(mem_size_gb) - 1
-  Int space_needed_gb = 10 + round(bam_size * 2.5)
+  Int space_needed_gb = 10 + round(bam_size * 3.5)
   runtime {
     maxRetries: 2
     preemptible: preemptible_tries