Build.PL

use strict;
use warnings;
use npg_tracking::util::build;

my $class = npg_tracking::util::build->subclass(code => <<'EOF');

  sub process_data_files {
    my $self = shift;
    # Do not copy PNG images
    `find data/config_files -type f -not -name '*.png' | cpio -pdv --quiet blib`;
    return;
  }
EOF

my $builder = $class->new(
         'module_name'         => 'npg_seq_pipeline',
         'dist_author'         => 'npg <npg@sanger.ac.uk>',
         'dist_version'        => npg_tracking::util::build->git_tag(),
         'dist_abstract'       => 'Wellcome Sanger Institute pluggable pipeline for Illumina sequencing post processing and QC',
         'license'             => 'gpl',
         'dist'                => { COMPRESS => 'gzip', SUFFIX => 'gz', },

         'requires'            => {
          'perl'                         => 5.010,
          'autodie'                      => 0,
          'Carp'                         => 1.04,
          'Cwd'                          => 0,
          'Class::Load'                  => 0,
          'Config::Any'                  => 0,
          'Data::Dump'                   => 0,
          'Date::Format'                 => 0,
          'DateTime'                     => 0,
          'English'                      => 1.02,
          'File::Basename'               => 0,
          'File::Copy'                   => 0,
          'File::Find'                   => 0,
          'File::Path'                   => 0,
          'File::Slurp'                  => 0,
          'File::Spec'                   => 0,
          'File::Spec::Functions'        => 0,
          'FindBin'                      => 0,
          'Getopt::Long'                 => 2.37,
          'Graph'                        => 0.9704,
          'HTTP::Request'                => 0,
          'JSON'                         => 0,
          'JSON::XS'                     => 0,
          'JSON::Validator'              => 0,
          'lib'                          => 0,
          'List::MoreUtils'              => 0,
          'List::Util'                   => 0,
          'Log::Log4perl'                => 0,
          'Log::Dispatch::Syslog'        => 2.70,
          'Math::Random::Secure'         => 0,
          'MIME::Base64'                 => 0,
          'Moose'                        => 0.93,
          'Moose::Meta::Class'           => 0,
          'Moose::Role'                  => 0,
          'Moose::Util::TypeConstraints' => 0,
          'MooseX::AttributeCloner'      => 0.17,
          'MooseX::Getopt'               => 0,
          'MooseX::Singleton'            => 0,
          'MooseX::StrictConstructor'    => 0,
          'namespace::autoclean'         => 0,
          'Perl6::Slurp'                 => 0,
          'POSIX'                        => 0,
          'Pod::Usage'                   => 0,
          'Readonly'                     => 1.03,
          'strict'                       => 1.03,
          'Sys::Filesystem::MountPoint'  => 0,
          'Try::Tiny'                    => 0,
          'UUID'                         => 0,
          'URI'                          => 0,
          'warnings'                     => 1.05,
          'YAML'                         => 0,
          'YAML::XS'                     => 0,
          'XML::LibXML'                  => 0,

          'npg_common::roles::software_location'               => 0,
          'npg_tracking::data::reference::find'                => 0,
          'npg_tracking::data::reference::list'                => 0,
          'npg_tracking::data::primer_panel'                   => 0,
          'npg_tracking::data::bait'                           => 0,
          'npg_tracking::data::transcriptome'                  => 0,
          'npg_tracking::data::gbs_plex'                       => 0,
          'npg_tracking::glossary::run'                        => 0,
          'npg_tracking::glossary::rpt'                        => 0,
          'npg_tracking::glossary::composition::factory::rpt_list' => 0,
          'npg_tracking::illumina::runfolder'                  => 0,
          'npg_tracking::Schema'                               => 0,
          'npg_tracking::util::types'                          => 0,
          'npg_tracking::util::abs_path'                       => 0,
          'npg_tracking::util::pipeline_config'                => 0,
          'npg_qc::Schema'                                     => 0,
          'npg_qc::autoqc::role::result'                       => 0,
          'npg_qc::autoqc::qc_store'                           => 0,
          'npg_qc::autoqc::constants'                          => 0,
          'npg_qc::illumina::interop::parser'                  => 0,
          'st::api::lims'                                      => 0,
          'st::api::lims::ml_warehouse'                        => 0,
          'npg::samplesheet'                                   => 0,
          'WTSI::DNAP::Utilities::Loggable'                    => 0,
          'WTSI::DNAP::Warehouse::Schema'                      => 0,
          'WTSI::DNAP::Warehouse::Schema::Query::IseqFlowcell' => 0,
          'WTSI::DNAP::Utilities::Loggable'                    => 0,
          'WTSI::NPG::iRODS'                                   => 0,
          'WTSI::NPG::iRODS::Collection'                       => 0,
         },

         'build_requires'      => {
          'Data::Compare'               => 0,
          'Digest::MD5'                 => 0,
          'File::Copy::Recursive'       => 0,
          'File::Temp'                  => 0,
          'File::Which'                 => 0,
          'IO::Compress::Bzip2'         => 0,
          'Moose::Util'                 => 0,
          'Sys::Hostname'               => 0,
          'Test::Deep'                  => 0,
          'Test::Exception'             => 0,
          'Test::Differences'           => 0,
          'Test::More'                  => '0.8',
          'Test::Perl::Critic'          => 0,
          'Test::Trap'                  => 0,
          'Test::Warn'                  => 0,
          'npg_testing::db'             => 0,
          'npg_tracking::util::build'   => 0,
          'npg_tracking::glossary::composition::component::illumina' => 0,
          'npg_tracking::glossary::composition' => 0,
         },
);

if ($builder->install_base()) {
  $builder->install_path('data' => join q{/}, $builder->install_base(), 'data');
  $builder->add_build_element('data');
} else {
  warn "WARNING: '--install_base' option is not given, 'data' element will not be installed\n\n";
}
$builder->create_build_script();

1;