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Remove 0-th shell from density array in CSVY case #95

Remove 0-th shell from density array in CSVY case

Remove 0-th shell from density array in CSVY case #95

Workflow file for this run

# For more information about TARDIS pipelines, please refer to:
#
# https://tardis-sn.github.io/tardis/development/continuous_integration.html
name: tests
on:
push:
branches:
- '*'
pull_request:
branches:
- '*'
env:
CACHE_NUMBER: 0 # increase to reset cache manually
PYTEST_FLAGS: --tardis-refdata=${{ github.workspace }}/tardis-refdata --tardis-snapshot-data=${{ github.workspace }}/tardis-regressions
--cov=tardis --cov-report=xml --cov-report=html
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash -l {0}
jobs:
build:
if: github.repository_owner == 'tardis-sn'
strategy:
matrix:
pip: [true, false]
label: [osx-64, linux-64]
include:
- label: osx-64
os: macos-latest
prefix: /Users/runner/miniconda3/envs/tardis
- label: linux-64
os: ubuntu-latest
prefix: /usr/share/miniconda3/envs/tardis
name: ${{ matrix.label }}-pip-${{ matrix.pip }}
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v2
if: matrix.pip == false
- name: Clone tardis-sn/tardis-refdata
uses: actions/checkout@v2
with:
repository: tardis-sn/tardis-refdata
path: tardis-refdata
lfs: false
- name: Create LFS file list
run: git lfs ls-files -l | cut -d' ' -f1 | sort > .lfs-assets-id
working-directory: tardis-refdata
- name: Restore LFS cache
uses: actions/cache/restore@v3
id: lfs-cache
with:
path: tardis-refdata/.git/lfs
key: ${{ runner.os }}-lfs-${{ hashFiles('tardis-refdata/.lfs-assets-id') }}-v1
- name: Git LFS Pull
run: git lfs pull
working-directory: tardis-refdata
if: steps.lfs-cache.outputs.cache-hit != 'true'
- name: Git LFS Checkout
run: git lfs checkout
working-directory: tardis-refdata
if: steps.lfs-cache.outputs.cache-hit == 'true'
- name: Save LFS cache if not found
# uses fake ternary
# for reference: https://github.com/orgs/community/discussions/26738#discussioncomment-3253176
if: ${{ steps.lfs-cache.outputs.cache-hit != 'true' && always() || false }}
uses: actions/cache/save@v3
id: lfs-cache-save
with:
path: tardis-refdata/.git/lfs
key: ${{ runner.os }}-lfs-${{ hashFiles('tardis-refdata/.lfs-assets-id') }}-v1
- name: Clone tardis-sn/tardis-regressions
uses: actions/checkout@v4
with:
repository: tardis-sn/tardis-regressions
path: tardis-regressions
- name: Setup environment
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
activate-environment: tardis
use-mamba: true
- name: Download Lock File
run: wget -q https://raw.githubusercontent.com/tardis-sn/tardis/master/conda-${{ matrix.label }}.lock
if: matrix.pip == true
- uses: actions/cache@v2
with:
path: ${{ matrix.prefix }}
key: conda-${{ matrix.label }}-${{ hashFiles('conda-${{ matrix.label }}.lock') }}-${{ env.CACHE_NUMBER }}
id: cache-conda
- name: Update environment
run: mamba update -n tardis --file conda-${{ matrix.label }}.lock
if: steps.cache-conda.outputs.cache-hit != 'true'
- name: Install package editable
run: |
pip install -e .
echo "TARDIS_PIP_PATH=tardis" >> $GITHUB_ENV
if: matrix.pip == false
- name: Install package git
run: pip install git+https://github.com/tardis-sn/tardis.git@${{ github.ref }}
if: matrix.pip == true
- name: Set pip path
if: matrix.pip == true
run: |
location_line=$(pip show tardis | grep -i -x "Location:.*")
directory_path=$(echo $location_line | awk -F " " '{print $2}')
echo "TARDIS_PIP_PATH=$directory_path" >> $GITHUB_ENV
- name: Set install path
if: matrix.pip == false
run: |
directory_path="."
echo "TARDIS_PIP_PATH=$directory_path" >> $GITHUB_ENV
- name: Run tests
run: pytest tardis ${{ env.PYTEST_FLAGS }}
working-directory: ${{ env.TARDIS_PIP_PATH }}
- name: Upload to Codecov
run: bash <(curl -s https://codecov.io/bash)