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Builds and hashes a database of protein loops. Includes lookup functionality.

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#Loop database generation and query tools Will Hooper 2017
Dependencies: None, requires InteractiveROSETTA for full functionality

#Compilation:

-Database Creation-
make database

-Lookup Characterization-
make characterize

-Lookup-
make lookup

#Making your own database from a folder of .pdb files: -compile database creation files
-move [database_creation.exe, pdblist_creation.exe, make_db.sh] to a folder of pdb files you'd like to compile a database from
-run make_db.sh
-outputs three database files

#Querying database: -compile lookup
-run lookup with an input file (see sample in scripts)
-outputs a list of matches, do whatever you want with them (or use this program how it was intended, with InteractiveROSETTA)

#http://www.bioinfo.rpi.edu/bystrc/

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