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build: update biobear
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@tshauck
tshauck committed Nov 9, 2023
1 parent 72e096d commit 9a938f2
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220 changes: 110 additions & 110 deletions .github/workflows/release.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,13 @@ name: Release

on:
push:
tags:
- 'v*'
workflow_dispatch:
inputs:
tag:
description: 'Tag to run for'
required: true
# tags:
# - 'v*'
# workflow_dispatch:
# inputs:
# tag:
# description: 'Tag to run for'
# required: true

permissions:
contents: read
Expand All @@ -21,110 +21,110 @@ jobs:
matrix:
target: [x86_64, aarch64, armv7]
steps:
- uses: actions/checkout@v3
with:
ref: ${{ github.event.inputs.tag || github.ref }}
- uses: actions/setup-python@v4
with:
python-version: '3.10'
- uses: actions-rs/toolchain@v1
with:
toolchain: stable
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
manylinux: auto
- name: Upload wheels
uses: actions/upload-artifact@v3
with:
name: wheels
path: dist
- uses: actions/checkout@v3
# with:
# ref: ${{ github.event.inputs.tag || github.ref }}
- uses: actions/setup-python@v4
with:
python-version: '3.10'
- uses: actions-rs/toolchain@v1
with:
toolchain: stable
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
manylinux: auto
# - name: Upload wheels
# uses: actions/upload-artifact@v3
# with:
# name: wheels
# path: dist

windows:
runs-on: windows-latest
strategy:
matrix:
target: [x64]
steps:
- uses: actions/checkout@v3
with:
ref: ${{ github.event.inputs.tag || github.ref }}
- uses: actions/setup-python@v4
with:
python-version: '3.10'
architecture: ${{ matrix.target }}
- uses: actions-rs/toolchain@v1
with:
toolchain: stable
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
- name: Upload wheels
uses: actions/upload-artifact@v3
with:
name: wheels
path: dist
# windows:
# runs-on: windows-latest
# strategy:
# matrix:
# target: [x64]
# steps:
# - uses: actions/checkout@v3
# with:
# ref: ${{ github.event.inputs.tag || github.ref }}
# - uses: actions/setup-python@v4
# with:
# python-version: '3.10'
# architecture: ${{ matrix.target }}
# - uses: actions-rs/toolchain@v1
# with:
# toolchain: stable
# - name: Build wheels
# uses: PyO3/maturin-action@v1
# with:
# target: ${{ matrix.target }}
# args: --release --out dist --find-interpreter
# sccache: 'true'
# - name: Upload wheels
# uses: actions/upload-artifact@v3
# with:
# name: wheels
# path: dist

macos:
runs-on: macos-latest
strategy:
matrix:
target: [x86_64, aarch64]
steps:
- uses: actions/checkout@v3
with:
ref: ${{ github.event.inputs.tag || github.ref }}
- uses: actions/setup-python@v4
with:
python-version: '3.10'
- uses: actions-rs/toolchain@v1
with:
toolchain: stable
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
- name: Upload wheels
uses: actions/upload-artifact@v3
with:
name: wheels
path: dist
# macos:
# runs-on: macos-latest
# strategy:
# matrix:
# target: [x86_64, aarch64]
# steps:
# - uses: actions/checkout@v3
# with:
# ref: ${{ github.event.inputs.tag || github.ref }}
# - uses: actions/setup-python@v4
# with:
# python-version: '3.10'
# - uses: actions-rs/toolchain@v1
# with:
# toolchain: stable
# - name: Build wheels
# uses: PyO3/maturin-action@v1
# with:
# target: ${{ matrix.target }}
# args: --release --out dist --find-interpreter
# sccache: 'true'
# - name: Upload wheels
# uses: actions/upload-artifact@v3
# with:
# name: wheels
# path: dist

sdist:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
ref: ${{ github.event.inputs.tag || github.ref }}
- name: Build sdist
uses: PyO3/maturin-action@v1
with:
command: sdist
args: --out dist
- name: Upload sdist
uses: actions/upload-artifact@v3
with:
name: wheels
path: dist
# sdist:
# runs-on: ubuntu-latest
# steps:
# - uses: actions/checkout@v3
# with:
# ref: ${{ github.event.inputs.tag || github.ref }}
# - name: Build sdist
# uses: PyO3/maturin-action@v1
# with:
# command: sdist
# args: --out dist
# - name: Upload sdist
# uses: actions/upload-artifact@v3
# with:
# name: wheels
# path: dist

release:
name: Release
runs-on: ubuntu-latest
needs: [linux, windows, macos, sdist]
steps:
- uses: actions/download-artifact@v3
with:
name: wheels
- name: Publish to PyPI
uses: PyO3/maturin-action@v1
with:
command: upload
args: --skip-existing *
# release:
# name: Release
# runs-on: ubuntu-latest
# needs: [linux, windows, macos, sdist]
# steps:
# - uses: actions/download-artifact@v3
# with:
# name: wheels
# - name: Publish to PyPI
# uses: PyO3/maturin-action@v1
# with:
# command: upload
# args: --skip-existing *
2 changes: 1 addition & 1 deletion Cargo.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ name = "biobear"
[dependencies]
arrow = {version = "47", features = ["pyarrow"]}
datafusion = "32"
exon = {version = "0.3.8-beta.4", features = ["all"]}
exon = {version = "0.3.9", features = ["all"]}
pyo3 = "0.19"
thiserror = "1.0"
tokio = {version = "1", features = ["rt"]}
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