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1. souporcell souporcell Public

   Clustering scRNAseq by genotypes

   Python 168 46

2. distinguishing_kmers distinguishing_kmers Public

   Memory efficient (approximate) thresholded kmer set subtraction using mod hash minimizer.

   Rust 5

3. dna_io dna_io Public

   automatic reading of fastq, fastq.gz, fasta, and possibly sam and bam (and cram?) and writing to your choice of format

   Rust 1

4. long_read_binner long_read_binner Public

   tool to bin long noisy DNA reads by kmer sets

   Rust 7

5. haplovalidate haplovalidate Public

   method for validating genome assemblies using heterozygous kmers detected from short read data

   Rust 3