Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Docs: Update TeachOpenCADD citations #295

Merged
merged 3 commits into from
Dec 27, 2022
Merged

Docs: Update TeachOpenCADD citations #295

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
2f9b45a
Docs: Link to citations in README [skip ci]
dominiquesydow Dec 27, 2022
26c7e39
Trigger CI
dominiquesydow Dec 27, 2022
9e56ccf
Docs: Rewording [skip ci]
dominiquesydow Dec 27, 2022
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
46 changes: 2 additions & 44 deletions docs/index.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -60,50 +60,8 @@ Table of contents
Citation
--------

If you make use of the TeachOpenCADD material in scientific publications, please cite our respective articles:

- `TeachOpenCADD Jupyter Notebooks: Talktorials T001-T010 <https://jcheminf.biomedcentral.com/articles/10.1186/s13321-019-0351-x>`_
- `TeachOpenCADD KNIME workflows <https://pubs.acs.org/doi/10.1021/acs.jcim.9b00662>`_
- `How to use the TeachOpenCADD material for teaching? <https://pubs.acs.org/doi/abs/10.1021/bk-2021-1387.ch010>`_

It will help measure the impact of the TeachOpenCADD platform and future funding!

.. code-block::

@article{TeachOpenCADD2019,
author = {Sydow, Dominique and Morger, Andrea and Driller, Maximilian and Volkamer, Andrea},
title = {{TeachOpenCADD: a teaching platform for computer-aided drug design using open source packages and data}},
doi = {10.1186/s13321-019-0351-x},
url = {https://doi.org/10.1186/s13321-019-0351-x},
journal = {J. Cheminform.},
volume = {11},
number = {1},
pages = {29},
year = {2019}
}

@article{TeachOpenCADDKNIME2019,
author = {Sydow, Dominique and Wichmann, Michele and Rodríguez-Guerra, Jaime and Goldmann, Daria and Landrum, Gregory and Volkamer, Andrea},
title = {{TeachOpenCADD-KNIME: A Teaching Platform for Computer-Aided Drug Design Using KNIME Workflows}},
doi = {10.1021/acs.jcim.9b00662},
url = {https://doi.org/10.1021/acs.jcim.9b00662},
journal = {Journal of Chemical Information and Modeling},
volume = {59},
number = {10},
pages = {4083-4086},
year = {2019}
}

@inbook{doi:10.1021/bk-2021-1387.ch010,
author = {Sydow, Dominique and Rodríguez-Guerra, Jaime and Volkamer, Andrea},
title = {Teaching Computer-Aided Drug Design Using TeachOpenCADD},
booktitle = {Teaching Programming across the Chemistry Curriculum},
chapter = {10},
pages = {135-158},
doi = {10.1021/bk-2021-1387.ch010},
URL = {https://pubs.acs.org/doi/abs/10.1021/bk-2021-1387.ch010},
}

If you make use of the TeachOpenCADD material in scientific publications,
please cite our respective articles as summarized `here <https://github.com/volkamerlab/teachopencadd#citation>`_.

Funding
-------
Expand Down
2 changes: 1 addition & 1 deletion docs/installing.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -32,7 +32,7 @@ Install from the conda package
In this example command, you are setting up your workspace in the current directory ``.``; you can use any other path.

You can always return to your TeachOpenCADD material with ``jupyter lab /path/to/your/teachopencadd/workspace``.
If you need an introduction to Jupyter notebooks, please check :ref:`here<jupyter_tutorial>`
If you need an introduction to Jupyter notebooks, please check out the suggested resources :ref:`here<jupyter_tutorial>`.

Install from the latest development snapshot
--------------------------------------------
Expand Down