Notes
This minor release fixes the following bugs:
- Ambiguous alignment positions are now reported in 1-based coordinates (instead of 0-based) when parsing sam files.
- The
--wrap
/-w
argument togofasta sam toMultiAlign
andtoPairAlign
no longer has a default value of 80 nucleotides if you invoke the flag on the command line without an argument. This is to fix a bug in flag parsing.