Resolve jinja2 dependency error for sphinx #185
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elaubsch
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Apr 1, 2022
elaubsch
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* SpotDetection to Polaris app * Create spot detection consumer * Initial commit of super consumer * Add output function for coords only * Increase MAX_SCALE setting * Update spot _consume tests * Manual 2 model channel wrangling * Switch output dimensions and refactor label to channels * Remove label detection model * Update model/app label and cap batch size * Fix dimension handling in polaris consumer * Spot predict params from settings.py * Allow two cell assignments per spot * Add Polaris test * Pin jinja2 to <3.1 (#185) * Add unit test for _add_images * Add unit tests for _consume * Add unit test for _analyze_images * Patch get_image function * Mock successful status * Add cell culture and tissue tests * Consolidate channel logic * Move Polaris scale to settings Co-authored-by: Morgan Schwartz <[email protected]>
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Closes #184