smhash

C++ implementation of MinHash and Containment Hash algorithms used in long read mapping

Completed as a part of the Fall '17 CSE549 graduate course taught by Prof Rob Patro at Stony Brook University.

Group members:

Saraj Munjal (ID#: 111497962, smunjal)
Vaibhav Rustagi (ID#: 111462063, vrustagi) Ashish Yadav (ID#: , 111486009, ashyadav)

How to run

1. make clean
2. make
3. Run ./containmenthash/bin/containmenthash