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npavlovikj authored Nov 30, 2022
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# Using bioBakery tools on HCC Clusters

These scripts give an example of running common [bioBakery tools](https://github.com/biobakery/biobakery) on our clusters, such as:
These submit scripts are examples of how to run some common [bioBakery tools](https://github.com/biobakery/biobakery) on our clusters, such as:

-[KneadData](https://github.com/biobakery/kneaddata)

-[MetaPhlAn](https://github.com/biobakery/MetaPhlAn/wiki/MetaPhlAn-4)

-[HUMAnN](https://github.com/biobakery/humann)

-[MaAsLin2](https://huttenhower.sph.harvard.edu/maaslin/)

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