Remove autoAddDuals in VariableContainer for io routines #262

	# This workflow will install Python dependencies, run tests and lint with a single version of Python
	# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

	name: pytest

	on: [push]

	permissions:
	contents: read

	jobs:
	build:

	strategy:
	matrix:
	python-version: ["3.8"]
	os: [ubuntu-latest]
	runs-on: ${{ matrix.os }}

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v3
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install pytest
	pip install pytest-cov
	pip install sphinx
	pip install nbsphinx
	pip install nbsphinx-link
	pip install pydata_sphinx_theme
	pip install .

	sudo apt-get install --no-install-recommends pandoc
	sudo apt-get install texlive-full latexmk

	- name: Test with custom pytest runner
	run: \|
	bash ./test.sh --cov=RMK_support --cov-config=.coveragerc . --cov-report xml

	- name: Upload code coverage
	uses: codecov/codecov-action@v3
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	files: ${{ github.workspace }}/RMK_support/tests/coverage.xml
	fail_ci_if_error: true # optional (default = false)
	verbose: true # optional (default = false)

	- name: Test documentation build
	run: \|
	sphinx-apidoc -f -o docs/source/ RMK_support/
	cd docs/
	make html

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