Update fms lib to use the version installed with avx #778
Conversation
junwang-noaa
requested review from
DusanJovic-NOAA,
climbfuji and
MinsukJi-NOAA
junwang-noaa
added
Baseline Updates
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Automated RT Failure Notification |
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Automated RT Failure Notification |
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I checked all the 5 failed tests on gaea has error: JOB CANCELLED DUE TO TIME LIMIT". Will resubmit those tests |
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It is still running. When it is done, we can commit the PR |
* Construct var_defns components from dictionary. * Bring back config_defaults.yaml * Add support for sourcing yaml file into shell script. * Remove newline for printing config, json config fix. * Make QUILTING a sub-dictionary in predef_grids * Reorganize config_defaults.yaml by task and feature. * Bug fix with QUILTING=true. * Structure a dictionary based on a template dictionary. * Convert all WE2E config files to yaml. * Take care of problematic chars when converting to shell string. * Process only selected keys of config. * Add symlinked yaml config files. * Actually use yaml config files for WE2E tests. * Delete all shell WE2E configs. * Don't check for single quotes in test description. * Make WE2E work with yaml configs. * Make yaml default config format. * Bug fix in run_WE2E script. * Add utility to check validity of yaml config file. * Add config utility interface in ush directory. * Remove unused check_expt_config_vars script. * Add description to default config. * Reorganize source_config. * Add XML as one of the config formats. * Update custom_ESGgrid config. * Bug fix due to update. * Change ensemble seed. * Change POST_OUTPUT group due to merge. * Make xml and ini configs work. * Maintain config structure down to var_defns. * Add function to load structured shell config, put description under metadata * Flatten dicts before importing env now that shell config is structured. * Support python regex for selecting dict keys. * Add capability of sourcing task specific portion of config file. * Access var_defns via env variable. * Make names of tasks consistent with ex- and j- job script names. * Append pid to temp file. * Prettify user config, don't use " in xml texts. * Compare timestamp of csv vs all files instead of directory. * Fixes for some pylint suggestions. * Convert new configs to yaml. * Format python files with black (no functional change). * More readable yaml/json formats by using more data types. Only datetime type is now in quotes. * More readable yaml config files for WE2E and default configs. * Make config_defaults itself more readable. * Correct pyyaml list indentation issue. * Fix indentation in all config files. * Use unquoted WTIME in config_defaults * Cosmotic changes. * Fix due to merge. * Make __init__.py clearer. * Fixes due to merge. * Minor edits of comments. * Remove wcoss_dell_p3 from workflow (#810) * remove wcoss_dell_p3 * remove block for tide and gyre * Replace deprecated NCAR python environment with conda on Cheyenne (#812) * Fix issue on get_extrn_lbcs when FCST_LEN_HRS>=40 with netcdf (#814) * activate b file on hpss for >40h * add a new we2e test for fcst_len_hrs>40 * reduce fcst time for we2e * Convert new test case to yaml. * Fix formatting due to merge. * Convert new test case to yaml. * Fix unittest. * Merge develop * Remove exception logic from __init__.py * Minor change to cmd concat. * Make grid gen methods return dictionary, simplifis code a lot. * Add a comment why we are suppressing yaml import exception. * Minor change to beautify unittest output. * Add status badge for functional tests. * Reorder tasks in config_default and we2e test cases to match order in FV3LAM.xml * Keep single quotes and newlines in we2e test description. * Revert back to not rounding to 10 digits Co-authored-by: Chan-Hoo.Jeon-NOAA <[email protected]> Co-authored-by: Michael Kavulich <[email protected]>
PR Checklist
Ths PR is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR. Please consult the ufs-weather-model wiki if you are unsure how to do this.
This PR has been tested using a branch which is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR
An Issue describing the work contained in this PR has been created either in the subcomponent(s) or in the ufs-weather-model. The Issue should be created in the repository that is most relevant to the changes in contained in the PR. The Issue and the dependent sub-component PR
are specified below.
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Description
When the FMS was moved out of ufs-weather-model repository, the compile options to build fms library should be the same as the fms was built inside ufs-weather-model. The avx compile option was missed on hera. This needs to be fixed.
With the FMS library built with avx, the MOM6 results will change. This change as impact on all the regression test with mom6. New baseline needs to be created. There is no impact on all other platforms.
Issue(s) addressed
Testing
How were these changes tested? What compilers / HPCs was it tested with? Are the changes covered by regression tests? (If not, why? Do new tests need to be added?) Have regression tests and unit tests (utests) been run? On which platforms and with which compilers? (Note that unit tests can only be run on tier-1 platforms)
Dependencies
There is no dependency for this PR