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Update GDAS INIT utility to optionally use fracoro data #741

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merged 10 commits into from
Feb 28, 2023
Merged

Update GDAS INIT utility to optionally use fracoro data #741

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1f90ec1
Add util/gdas_init/run_v17.chgres.sh to use fracoro data for all new …
ChunxiZhang-NOAA Dec 14, 2022
4960ba5
Revert adding util/gdas_init/run_v17.chgres.sh and modify util/gdas_i…
ChunxiZhang-NOAA Jan 31, 2023
2345805
Modify util/gdas_init/run_*.chgres.sh and config files to make fracor…
ChunxiZhang-NOAA Feb 14, 2023
bfda260
Small changes to config file to reset to the default values
ChunxiZhang-NOAA Feb 14, 2023
b480757
Merge remote-tracking branch 'upstream/develop' into feature/fixfv3_v17
ChunxiZhang-NOAA Feb 15, 2023
c345d89
Modify config file and run_*.chgres.sh
ChunxiZhang-NOAA Feb 17, 2023
d8f998d
Add util/gdas_init/set_fixed_files.sh to use the new ORO data
ChunxiZhang-NOAA Feb 17, 2023
18fbdda
Minor changes to config and run_v16.chgres.sh
ChunxiZhang-NOAA Feb 17, 2023
0ec219a
Minor changes to run_v16retro.chgres.sh and set_fixed_files.sh
ChunxiZhang-NOAA Feb 23, 2023
2387abf
Merge remote-tracking branch 'upstream/develop' into feature/fixfv3_v17
ChunxiZhang-NOAA Feb 24, 2023
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9 changes: 7 additions & 2 deletions util/gdas_init/config
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Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,10 @@
# or incomplete. So this option may not
# always work. Contact [email protected]
# if you encounter problems.
# FRAC_ORO - To use the latest orographic data,
# set to 'yes', otherwise, set to 'no'.
# Note that: the latest orographic data
# support both frac_grid and none frac_grid in the UFS
#
#-----------------------------------------------------------

Expand All @@ -63,6 +67,8 @@ LEVS=65

CDUMP=gdas

FRAC_ORO=yes

CRES_HIRES=C192
CRES_ENKF=C96

Expand All @@ -73,7 +79,6 @@ OUTDIR=/lfs/h2/emc/stmp/$USER/gdas.init/output
#---------------------------------------------------------
# Dont touch anything below here.
#---------------------------------------------------------

if [ "$use_v16retro" = "yes" ]; then

gfs_ver=v16retro
Expand Down Expand Up @@ -107,5 +112,5 @@ else

fi

export EXTRACT_DIR yy mm dd hh UFS_DIR OUTDIR CRES_HIRES CRES_ENKF
export EXTRACT_DIR yy mm dd hh UFS_DIR OUTDIR CRES_HIRES CRES_ENKF FRAC_ORO
export LEVS gfs_ver
10 changes: 6 additions & 4 deletions util/gdas_init/run_pre-v14.chgres.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -44,13 +44,15 @@ rm -fr $OUTDIR
mkdir -p $OUTDIR
mkdir -p $OUTDIR/INPUT

source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
data_dir_input_grid="${INPUT_DATA_DIR}"
atm_files_input_grid="$ATMFILE"
sfc_files_input_grid="$SFCFILE"
Expand Down
10 changes: 6 additions & 4 deletions util/gdas_init/run_v14.chgres.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -40,13 +40,15 @@ rm -fr $OUTDIR
mkdir -p $OUTDIR
mkdir -p $OUTDIR/INPUT

source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
data_dir_input_grid="${INPUT_DATA_DIR}"
atm_files_input_grid="$ATMFILE"
sfc_files_input_grid="$SFCFILE"
Expand Down
10 changes: 6 additions & 4 deletions util/gdas_init/run_v15.chgres.gfs.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -27,13 +27,15 @@ rm -fr $OUTDIR
mkdir -p $OUTDIR
mkdir -p $OUTDIR/INPUT

source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
data_dir_input_grid="${INPUT_DATA_DIR}"
atm_files_input_grid="$ATMFILE"
sfc_files_input_grid="$SFCFILE"
Expand Down
10 changes: 6 additions & 4 deletions util/gdas_init/run_v15.chgres.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -44,13 +44,15 @@ rm -fr $OUTDIR
mkdir -p $OUTDIR
mkdir -p $OUTDIR/INPUT

source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
mosaic_file_input_grid="${FIX_ORO}/${CINP}/${CINP}_mosaic.nc"
orog_dir_input_grid="${FIX_ORO}/${CINP}"
orog_files_input_grid="${CINP}_oro_data.tile1.nc","${CINP}_oro_data.tile2.nc","${CINP}_oro_data.tile3.nc","${CINP}_oro_data.tile4.nc","${CINP}_oro_data.tile5.nc","${CINP}_oro_data.tile6.nc"
Expand Down
10 changes: 6 additions & 4 deletions util/gdas_init/run_v16.chgres.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -59,13 +59,15 @@ rm -fr $WORKDIR
mkdir -p $WORKDIR
cd $WORKDIR

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source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
data_dir_input_grid="${INPUT_DATA_DIR}"
atm_files_input_grid="${ATMFILE}"
sfc_files_input_grid="${SFCFILE}"
Expand Down
10 changes: 6 additions & 4 deletions util/gdas_init/run_v16retro.chgres.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -69,13 +69,15 @@ rm -fr $WORKDIR
mkdir -p $WORKDIR
cd $WORKDIR

source $UFS_DIR/util/gdas_init/set_fixed_files.sh

cat << EOF > fort.41

&config
fix_dir_target_grid="${FIX_ORO}/${CTAR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${CTAR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${CTAR}"
orog_files_target_grid="${CTAR}_oro_data.tile1.nc","${CTAR}_oro_data.tile2.nc","${CTAR}_oro_data.tile3.nc","${CTAR}_oro_data.tile4.nc","${CTAR}_oro_data.tile5.nc","${CTAR}_oro_data.tile6.nc"
fix_dir_target_grid="${FIX_ORO}/${ORO_DIR}/fix_sfc"
mosaic_file_target_grid="${FIX_ORO}/${ORO_DIR}/${CTAR}_mosaic.nc"
orog_dir_target_grid="${FIX_ORO}/${ORO_DIR}"
orog_files_target_grid="${ORO_NAME}.tile1.nc","${ORO_NAME}.tile2.nc","${ORO_NAME}.tile3.nc","${ORO_NAME}.tile4.nc","${ORO_NAME}.tile5.nc","${ORO_NAME}.tile6.nc"
mosaic_file_input_grid="${FIX_ORO}/${CINP}/${CINP}_mosaic.nc"
orog_dir_input_grid="${FIX_ORO}/${CINP}"
orog_files_input_grid="${CINP}_oro_data.tile1.nc","${CINP}_oro_data.tile2.nc","${CINP}_oro_data.tile3.nc","${CINP}_oro_data.tile4.nc","${CINP}_oro_data.tile5.nc","${CINP}_oro_data.tile6.nc"
Expand Down
23 changes: 23 additions & 0 deletions util/gdas_init/set_fixed_files.sh
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Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
#!/bin/bash
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#---------------------------------------------------------------------------
# Set directory names and file names for orog data
# The old and new (support fractional grid) orog data have different file names
#---------------------------------------------------------------------------

if [ "${FRAC_ORO:-"no"}" = "yes" ]; then
if [ ${CTAR} == 'C48' ] ; then
OCNRES='500'
elif [ ${CTAR} == 'C96' ] ; then
OCNRES='100'
elif [ ${CTAR} == 'C192' ] ; then
OCNRES='050'
elif [ ${CTAR} == 'C384' ] || [ ${CTAR} == 'C768' ] || [ ${CTAR} == 'C1152' ]; then
OCNRES='025'
fi
ORO_DIR="${CTAR}.mx${OCNRES}_frac"
ORO_NAME="oro_${CTAR}.mx${OCNRES}"
else
ORO_DIR="${CTAR}"
ORO_NAME="${CTAR}_oro_data"
fi