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Do not sort output with -S option #18

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erikrikarddaniel
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Hi, and thanks for the script.

I need to keep the order of input sequences in converting from stockholm to fasta, so I added this governed by the new flag -S. (I chose capital S as it's a an option not to do the default; -s would make more sense to ensure output is sorted.)

I changed the first letter in the first sequence of test.sth to ensure it works like I want it. I also bumped the version number.

(Since I'm using vim, I also added a file pattern for vim's rescue files to .gitignore.)

/Daniel

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