Add feature flags to CLI args (#3359)

* Update main.go

* Update main.go

main.go

@@ -30,6 +30,7 @@ import (
 	"github.com/trufflesecurity/trufflehog/v3/pkg/handlers"
 	"github.com/trufflesecurity/trufflehog/v3/pkg/log"
 	"github.com/trufflesecurity/trufflehog/v3/pkg/output"
+	"github.com/trufflesecurity/trufflehog/v3/pkg/feature"
 	"github.com/trufflesecurity/trufflehog/v3/pkg/sources"
 	"github.com/trufflesecurity/trufflehog/v3/pkg/tui"
 	"github.com/trufflesecurity/trufflehog/v3/pkg/updater"
@@ -70,6 +71,12 @@ var (
 	excludeDetectors     = cli.Flag("exclude-detectors", "Comma separated list of detector types to exclude. Protobuf name or IDs may be used, as well as ranges. IDs defined here take precedence over the include list.").String()
 	jobReportFile        = cli.Flag("output-report", "Write a scan report to the provided path.").Hidden().OpenFile(os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0666)
 
+	// Add feature flags
+	forceSkipBinaries = cli.Flag("force-skip-binaries", "Force skipping binaries.").Bool()
+	forceSkipArchives = cli.Flag("force-skip-archives", "Force skipping archives.").Bool()
+	skipAdditionalRefs = cli.Flag("skip-additional-refs", "Skip additional references.").Bool()
+	userAgentSuffix = cli.Flag("user-agent-suffix", "Suffix to add to User-Agent.").String()
+
 	gitScan             = cli.Command("git", "Find credentials in git repositories.")
 	gitScanURI          = gitScan.Arg("uri", "Git repository URL. https://, file://, or ssh:// schema expected.").Required().String()
 	gitScanIncludePaths = gitScan.Flag("include-paths", "Path to file with newline separated regexes for files to include in scan.").Short('i').String()
@@ -368,6 +375,23 @@ func run(state overseer.State) {
 		}()
 	}
 
+  	// Set feature configurations from CLI flags
+	if *forceSkipBinaries {
+		feature.ForceSkipBinaries.Store(true)
+	}
+
+	if *forceSkipArchives {
+		feature.ForceSkipArchives.Store(true)
+	}
+
+	if *skipAdditionalRefs {
+		feature.SkipAdditionalRefs.Store(true)
+	}
+
+	if *userAgentSuffix != "" {
+		feature.UserAgentSuffix.Store(*userAgentSuffix)
+	}
+
 	conf := &config.Config{}
 	if *configFilename != "" {
 		var err error