Failed build with trilinos-release-12-6

[BarrySmith]

I'm unable to build the trilinos-release-12-6-branch

Obtaining errors of the form

../../../../../tpetra/core/src/libtpetra.so.12.6: undefined reference to `KokkosBlas::Impl::Update<Kokkos::View<int con
st**, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, Kokkos::Impl::Vi
ewDefault>, Kokkos::View<int const**, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::Me
moryTraits<1u>, Kokkos::Impl::ViewDefault>, Kokkos::View<int**, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokk
os::HostSpace>, Kokkos::MemoryTraits<1u>, Kokkos::Impl::ViewDefault>, 2>::update(int const&, Kokkos::View<int const**,
Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, Kokkos::Impl::ViewDefa
ult> const&, int const&, Kokkos::View<int const**, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace\

, Kokkos::MemoryTraits<1u>, Kokkos::Impl::ViewDefault> const&, int const&, Kokkos::View<int**, Kokkos::LayoutLeft, Kok
kos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, Kokkos::Impl::ViewDefault> const&)'
../../../../../tpetra/core/src/libtpetra.so.12.6: undefined reference to `KokkosSparse::Impl::SPMV_MV<double const*, Ko
kkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, double const, int, Kokko
s::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, unsigned long, double const**, Kokkos::LayoutLe
ft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<3u>, double const*, Kokkos::LayoutLeft, Kok
kos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, double**, Kokkos::LayoutLeft, Kokkos::Device<
Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u> >::spmv_mv(char const_, double const&, KokkosSparse::CrsMa
trix<double const, int, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, unsigned long> con
st&, Kokkos::View<double const__, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::Memory
Traits<3u>, Kokkos::Impl::ViewDefault> const&, double const&, Kokkos::View<double_*, Kokkos::LayoutLeft, Kokkos::Device
<Kokkos::Serial, Kokkos::HostSpace>, Kokkos::MemoryTraits<1u>, Kokkos::Impl::ViewDefault> const&)'

Full log including configure options and machine configuration can be found at

ftp://ftp.mcs.anl.gov/pub/petsc/trilinos-release-12-6-failure

The same configure options have worked successfully with Trilinos 'master' branch.
@jwillenbring

[jwillenbring]

@mhoemmen let me know if it would be better to have @crtrott or someone else take a look at this.

Thanks

Jim

[mhoemmen]

Hi Jim! I am not able to access Github for the next two days, due to travel. Sorry about that! I could look at this afterwards.

On Feb 10, 2016, at 10:57 PM, jwillenbring <[email protected]mailto:[email protected]> wrote:

@mhoemmenhttps://github.com/mhoemmen let me know if it would be better to have @crtrotthttps://github.com/crtrott or someone else take a look at this.

Thanks

Jim

Reply to this email directly or view it on GitHubhttps://github.com//issues/135#issuecomment-182407684.

[mhoemmen]

@BarrySmith Hi Barry -- I was traveling Thu-Fri last week and am a bit of a jet-lagged zombie at the moment, but I'll make sure that the priority for this gets bumped.

[mhoemmen]

Adding @crtrott to the CC list.

[jwillenbring]

My initial attempts to reproduce this have failed. I am going back now and trying to reproduce it through the xSDK install script. My attempts to reproduce did not have all of the TPLs available, so I turned a few options off. I didn't think those were related to the error, but we will see how this other attempt goes.

[mhoemmen]

Reassigning to @jwillenbring since he has been working on it. Thanks Jim :-)

[jwillenbring]

Barry,

I was not able to reproduce this. Here is what I tried:

1. I looked at your configure arguments and tried to reproduce something close by hand with a standard Trilinos build. I did not turn on all TPL's, as they weren't all quickly available, but I didn't turn off anything that I thought looked like a likely problem.
2. When that was unsuccessful, I decided since you are doing this in the context of an xsdk build, I would try to do the same. I tried to build from the xsdk install repo. That build also passed.

Did you use some special options for an xsdk build, or can you offer some other hint as to how I can reproduce this? If you send me the options you passed to the xsdk install process, that would maybe allow me to reproduce the issue.

Thanks

Jim

[BarrySmith]

Jim,

Thanks for checking this. I checked last nights test build and it is able to succeed. I suspect some update to the release branch between my report and now has resolved the problem.

Barry

On Mar 10, 2016, at 3:30 PM, jwillenbring [email protected] wrote:

Barry,

I was not able to reproduce this. Here is what I tried:

1. I looked at your configure arguments and tried to reproduce something close by hand with a standard Trilinos build. I did not turn on all TPL's, as they weren't all quickly available, but I didn't turn off anything that I thought looked like a likely problem.
2. When that was unsuccessful, I decided since you are doing this in the context of an xsdk build, I would try to do the same. I tried to build from the xsdk install repo. That build also passed.

Did you use some special options for an xsdk build, or can you offer some other hint as to how I can reproduce this? If you send me the options you passed to the xsdk install process, that would maybe allow me to reproduce the issue.

Thanks

Jim

—
Reply to this email directly or view it on GitHub.

[jwillenbring]

Per Barry's comment, I am closing this issue.

[mhoemmen]

Praise Turing! :D