Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
In-silico PCR, primer design and padlock design for in-situ sequencing
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
In-silico PCR amplification on complete genomes
A tool to batch-generate optimal DNA primers for Sanger sequencing. Output .xlsx file is directly compatible with IDT Oligo Entry.
Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.
SYLENS: Sampling Yielding LEss Noticeable Samples
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results
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