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duplex-sequencing

Here are 4 public repositories matching this topic...

OpenGene / gencore

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

bioinformatics duplex ngs sequencing consensus duplication deduplication somatic deep-sequencing sequencing-error sequencing-noise duplex-sequencing

Updated Oct 27, 2023
C++

Green-Lab-MDACC / CAPP_SEQ_pipeline

ctdna duplex-sequencing single-stranded-dna-sequencing

Updated Jan 26, 2023
Shell

ndbrown6 / innovation-lab

MSKCC CMO Innovation Lab

python r pipeline makefile perl conda high-performance-computing umi high-throughput-sequencing copy-number-variation targeted-sequencing duplex-sequencing

Updated May 19, 2023
Makefile

clintval / mutpos2vcf

Script to convert Duplex Sequencing .mutpos file formats into valid VCF files

ngs mutation vcf variant-calling duplex-sequencing

Updated Sep 20, 2018
Python

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