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1. ascat ascat Public

   Forked from VanLoo-lab/ascat

   ASCAT copy number R package

   HTML 3 1

2. battenberg battenberg Public

   Forked from Wedge-lab/battenberg

   Battenberg R package for subclonal copynumber estimation

   R

3. CleanCNA CleanCNA Public archive

   Forked from afrangou/CleanCNA

   An R package to classify a copy number call as of high or low quality, to re-estimate purity and ploidy parameters based on a set of collected metrics, and to iteratively rerun the copy number call…

   R

4. myFun myFun Public

   myFun is a collection of my favorite R functions, packaged for simplicity.

   R

5. myConfig myConfig Public

   My useful configuration files.

   Shell

6. infercnv infercnv Public

   Forked from broadinstitute/infercnv

   Inferring CNV from Single-Cell RNA-Seq

   R