Merge branch 'master' into feature_selection

CHANGELOG.md

@@ -36,6 +36,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - Exogenous variables shift transform `ExogShiftTransform`([#1254](https://github.com/tinkoff-ai/etna/pull/1254))
 - Parameter `start_timestamp` to forecast CLI command ([#1265](https://github.com/tinkoff-ai/etna/pull/1265))
 - `DeepStateModel` ([#1253](https://github.com/tinkoff-ai/etna/pull/1253))
+- `NBeatsGenericModel` and `NBeatsInterpretableModel` ([#1302](https://github.com/tinkoff-ai/etna/pull/1302))
 - Function `estimate_max_n_folds` for folds number estimation ([#1279](https://github.com/tinkoff-ai/etna/pull/1279))
 - Parameters `estimate_n_folds` and `context_size` to forecast and backtest CLI commands ([#1284](https://github.com/tinkoff-ai/etna/pull/1284))
 - Class `Tune` for hyperparameter optimization within existing pipeline ([#1200](https://github.com/tinkoff-ai/etna/pull/1200))

etna/models/nn/__init__.py

@@ -4,6 +4,8 @@
     from etna.models.nn.deepar import DeepARModel
     from etna.models.nn.deepstate.deepstate import DeepStateModel
     from etna.models.nn.mlp import MLPModel
+    from etna.models.nn.nbeats import NBeatsGenericModel
+    from etna.models.nn.nbeats import NBeatsInterpretableModel
     from etna.models.nn.rnn import RNNModel
     from etna.models.nn.tft import TFTModel
     from etna.models.nn.utils import PytorchForecastingDatasetBuilder

etna/models/nn/nbeats/__init__.py

@@ -0,0 +1,5 @@
+from etna import SETTINGS
+
+if SETTINGS.torch_required:
+    from etna.models.nn.nbeats.nbeats import NBeatsGenericModel
+    from etna.models.nn.nbeats.nbeats import NBeatsInterpretableModel

etna/models/nn/nbeats/blocks.py

@@ -0,0 +1,240 @@
+from typing import Tuple
+
+import numpy as np
+
+from etna import SETTINGS
+
+if SETTINGS.torch_required:
+    import torch
+    import torch.nn as nn
+
+
+class NBeatsBlock(nn.Module):
+    """Base N-BEATS block which takes a basis function as an argument."""
+
+    def __init__(self, input_size: int, theta_size: int, basis_function: "nn.Module", num_layers: int, layer_size: int):
+        """N-BEATS block.
+
+        Parameters
+        ----------
+        input_size:
+            In-sample size.
+        theta_size:
+            Number of parameters for the basis function.
+        basis_function:
+            Basis function which takes the parameters and produces backcast and forecast.
+        num_layers:
+            Number of layers.
+        layer_size
+            Layer size.
+        """
+        super().__init__()
+
+        layers = [nn.Linear(in_features=input_size, out_features=layer_size), nn.ReLU()]
+        for _ in range(num_layers - 1):
+            layers.append(nn.Linear(in_features=layer_size, out_features=layer_size))
+            layers.append(nn.ReLU())
+
+        self.layers = nn.ModuleList(layers)
+
+        self.basis_parameters = nn.Linear(in_features=layer_size, out_features=theta_size)
+        self.basis_function = basis_function
+
+    def forward(self, x: "torch.Tensor") -> Tuple["torch.Tensor", "torch.Tensor"]:
+        """Forward pass.
+
+        Parameters
+        ----------
+        x:
+            Input data.
+
+        Returns
+        -------
+        :
+            Tuple with backcast and forecast.
+        """
+        for layer in self.layers:
+            x = layer(x)
+
+        basis_parameters = self.basis_parameters(x)
+        return self.basis_function(basis_parameters)
+
+
+class GenericBasis(nn.Module):
+    """Generic basis function."""
+
+    def __init__(self, backcast_size: int, forecast_size: int):
+        """Initialize generic basis function.
+
+        Parameters
+        ----------
+        backcast_size:
+            Number of backcast values.
+        forecast_size:
+            Number of forecast values.
+        """
+        super().__init__()
+        self.backcast_size = backcast_size
+        self.forecast_size = forecast_size
+
+    def forward(self, theta: "torch.Tensor") -> Tuple["torch.Tensor", "torch.Tensor"]:
+        """Forward pass.
+
+        Parameters
+        ----------
+        theta:
+            Basis function parameters.
+
+        Returns
+        -------
+        :
+            Tuple with backcast and forecast.
+        """
+        return theta[:, : self.backcast_size], theta[:, -self.forecast_size :]
+
+
+class TrendBasis(nn.Module):
+    """Polynomial trend basis function."""
+
+    def __init__(self, degree: int, backcast_size: int, forecast_size: int):
+        """Initialize trend basis function.
+
+        Parameters
+        ----------
+        degree:
+            Degree of polynomial for trend modeling.
+        backcast_size:
+            Number of backcast values.
+        forecast_size:
+            Number of forecast values.
+        """
+        super().__init__()
+        self.num_poly_terms = degree + 1
+
+        self.backcast_time = nn.Parameter(self._trend_tensor(size=backcast_size), requires_grad=False)
+        self.forecast_time = nn.Parameter(self._trend_tensor(size=forecast_size), requires_grad=False)
+
+    def _trend_tensor(self, size: int) -> "torch.Tensor":
+        """Prepare trend tensor."""
+        time = torch.arange(size) / size
+        degrees = torch.arange(self.num_poly_terms)
+        trend_tensor = torch.transpose(time[:, None] ** degrees[None], 0, 1)
+        return trend_tensor
+
+    def forward(self, theta: "torch.Tensor") -> Tuple["torch.Tensor", "torch.Tensor"]:
+        """Forward pass.
+
+        Parameters
+        ----------
+        theta:
+            Basis function parameters.
+
+        Returns
+        -------
+        :
+            Tuple with backcast and forecast.
+        """
+        backcast = theta[:, : self.num_poly_terms] @ self.backcast_time
+        forecast = theta[:, self.num_poly_terms :] @ self.forecast_time
+        return backcast, forecast
+
+
+class SeasonalityBasis(nn.Module):
+    """Harmonic seasonality basis function."""
+
+    def __init__(self, harmonics: int, backcast_size: int, forecast_size: int):
+        """Initialize seasonality basis function.
+
+        Parameters
+        ----------
+        harmonics:
+            Harmonics range.
+        backcast_size:
+            Number of backcast values.
+        forecast_size:
+            Number of forecast values.
+        """
+        super().__init__()
+
+        freq = torch.arange(harmonics - 1, harmonics / 2 * forecast_size) / harmonics
+        freq[0] = 0.0
+        frequency = torch.unsqueeze(freq, 0)
+
+        backcast_grid = -2 * np.pi * torch.arange(backcast_size)[:, None] / forecast_size
+        backcast_grid = backcast_grid * frequency
+
+        forecast_grid = 2 * np.pi * torch.arange(forecast_size)[:, None] / forecast_size
+        forecast_grid = forecast_grid * frequency
+
+        self.backcast_cos_template = nn.Parameter(torch.transpose(torch.cos(backcast_grid), 0, 1), requires_grad=False)
+        self.backcast_sin_template = nn.Parameter(torch.transpose(torch.sin(backcast_grid), 0, 1), requires_grad=False)
+        self.forecast_cos_template = nn.Parameter(torch.transpose(torch.cos(forecast_grid), 0, 1), requires_grad=False)
+        self.forecast_sin_template = nn.Parameter(torch.transpose(torch.sin(forecast_grid), 0, 1), requires_grad=False)
+
+    def forward(self, theta: "torch.Tensor") -> Tuple["torch.Tensor", "torch.Tensor"]:
+        """Forward pass.
+
+        Parameters
+        ----------
+        theta:
+            Basis function parameters.
+
+        Returns
+        -------
+        :
+            Tuple with backcast and forecast.
+        """
+        params_per_harmonic = theta.shape[1] // 4
+
+        backcast_harmonics_cos = theta[:, :params_per_harmonic] @ self.backcast_cos_template
+        backcast_harmonics_sin = theta[:, params_per_harmonic : 2 * params_per_harmonic] @ self.backcast_sin_template
+        backcast = backcast_harmonics_sin + backcast_harmonics_cos
+
+        forecast_harmonics_cos = (
+            theta[:, 2 * params_per_harmonic : 3 * params_per_harmonic] @ self.forecast_cos_template
+        )
+        forecast_harmonics_sin = theta[:, 3 * params_per_harmonic :] @ self.forecast_sin_template
+        forecast = forecast_harmonics_sin + forecast_harmonics_cos
+
+        return backcast, forecast
+
+
+class NBeats(nn.Module):
+    """N-BEATS model."""
+
+    def __init__(self, blocks: "nn.ModuleList"):
+        """Initialize N-BEATS model.
+
+        Parameters
+        ----------
+        blocks:
+            Model blocks.
+        """
+        super().__init__()
+        self.blocks = blocks
+
+    def forward(self, x: "torch.Tensor", input_mask: "torch.Tensor") -> "torch.Tensor":
+        """Forward pass.
+
+        Parameters
+        ----------
+        x:
+            Input data.
+        input_mask:
+            Input mask.
+
+        Returns
+        -------
+        :
+            Forecast tensor.
+        """
+        residuals = x.flip(dims=(1,))
+        input_mask = input_mask.flip(dims=(1,))
+        forecast = x[:, -1:]
+
+        for block in self.blocks:
+            backcast, block_forecast = block(residuals)
+            residuals = (residuals - backcast) * input_mask
+            forecast = forecast + block_forecast
+
+        return forecast

etna/models/nn/nbeats/metrics.py

@@ -0,0 +1,135 @@
+from enum import Enum
+
+import numpy as np
+
+from etna import SETTINGS
+
+if SETTINGS.torch_required:
+    import torch
+    import torch.nn as nn
+
+
+class NBeatsSMAPE(nn.Module):
+    """SMAPE with mask."""
+
+    def __init__(self):
+        super().__init__()
+
+    def forward(self, y_true: "torch.Tensor", y_pred: "torch.Tensor", mask: "torch.Tensor") -> "torch.Tensor":
+        """Compute metric.
+
+        Parameters
+        ----------
+        y_true:
+            True target.
+        y_pred:
+            Predicted target.
+        mask:
+            Binary mask that denotes which points are valid forecasts.
+
+        Returns
+        -------
+        :
+            Metric value.
+        """
+        ae = torch.abs(y_true - y_pred)
+        sape = ae / (torch.abs(y_true) + torch.abs(y_pred))
+
+        # TODO: perhaps there is a better way to handle invalid values
+        sape[sape != sape] = 0.0
+        sape[sape == np.inf] = 0.0
+
+        return 200.0 * torch.mean(sape * mask)
+
+
+class NBeatsMAPE(nn.Module):
+    """MAPE with mask."""
+
+    def __init__(self):
+        super().__init__()
+
+    def forward(self, y_true: "torch.Tensor", y_pred: "torch.Tensor", mask: "torch.Tensor") -> "torch.Tensor":
+        """Compute metric.
+
+        Parameters
+        ----------
+        y_true:
+            True target.
+        y_pred:
+            Predicted target.
+        mask:
+            Binary mask that denotes which points are valid forecasts.
+
+        Returns
+        -------
+        :
+            Metric value.
+        """
+        ape = torch.abs(y_true - y_pred) / torch.abs(y_true)
+
+        # TODO: perhaps there is a better way to handle invalid values
+        ape[ape != ape] = 0.0
+        ape[ape == np.inf] = 0.0
+
+        return 100.0 * torch.mean(ape * mask)
+
+
+class NBeatsMAE(nn.Module):
+    """MAE with mask."""
+
+    def __init__(self):
+        super().__init__()
+
+    def forward(self, y_true: "torch.Tensor", y_pred: "torch.Tensor", mask: "torch.Tensor") -> "torch.Tensor":
+        """Compute metric.
+
+        Parameters
+        ----------
+        y_true:
+            True target.
+        y_pred:
+            Predicted target.
+        mask:
+            Binary mask that denotes which points are valid forecasts.
+
+        Returns
+        -------
+        :
+            Metric value.
+        """
+        return torch.mean(mask * torch.abs(y_true - y_pred))
+
+
+class NBeatsMSE(nn.Module):
+    """MSE with mask."""
+
+    def __init__(self):
+        super().__init__()
+
+    def forward(self, y_true: "torch.Tensor", y_pred: "torch.Tensor", mask: "torch.Tensor") -> "torch.Tensor":
+        """Compute metric.
+
+        Parameters
+        ----------
+        y_true:
+            True target.
+        y_pred:
+            Predicted target.
+        mask:
+            Binary mask that denotes which points are valid forecasts.
+
+        Returns
+        -------
+        :
+            Metric value.
+        """
+        return torch.mean(mask * (y_true - y_pred) ** 2)
+
+
+class NBeatsLoss(Enum):
+    """Enum with N-BEATS supported losses."""
+
+    smape = NBeatsSMAPE()
+    mape = NBeatsMAPE()
+    mae = NBeatsMAE()
+    mse = NBeatsMSE()