**v.0.4.4**

* several updates to make function faster.
* `stackr_imputations_module` no longer imputes globally after imputations
by populations. Instead, use `common.markers` or not to test impacts.
*  bug fix with `ref_alt_alleles` that was not working properly inside
the imputation module.
* `snp_ld` is not a separate module available for users. Check documentation.
* `missing_visualization` now show the proportion of variance with plot axis text.

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: stackr
 Type: Package
 Title: GBS/RADseq Data Exploration, Manipulation and Visualization using R
-Version: 0.4.3
-Date: 2016-11-01
+Version: 0.4.4
+Date: 2016-11-13
 Encoding: UTF-8
 Authors@R: c(
   person("Thierry", "Gosselin", email = "[email protected]", role = c("aut", "cre")),

README.Rmd

@@ -119,16 +119,19 @@ citation("stackr")
 ## New features
 Change log, version, new features and bug history now lives in the [NEWS.md file](https://github.com/thierrygosselin/stackr/blob/master/NEWS.md)
 
+**v.0.4.4**
+* several updates to make function faster.
+* `stackr_imputations_module` no longer imputes globally after imputations
+by populations. Instead, use `common.markers` or not to test impacts.
+*  bug fix with `ref_alt_alleles` that was not working properly inside
+the imputation module.
+* `snp_ld` is not a separate module available for users. Check documentation.
+* `missing_visualization` now show the proportion of variance with plot axis text.
+
 **v.0.4.3**
 * bug fix in `summary_haplotypes` stemming from a new `readr` version
 * `artifacts` replace `paralogs` in `summary_haplotypes`
 
-
-**v.0.4.2**
-* `gtypes` object from [strataG](https://github.com/EricArcher/strataG) package
-can now be read/write in/out of **Stackr** using the `tidy_genomic_data` and 
-`genomic_converter` functions.
-
 For previous news:
 [NEWS.md file](https://github.com/thierrygosselin/stackr/blob/master/NEWS.md)
 

inst/CITATION

@@ -7,5 +7,5 @@ year = "2016",
 author = personList(as.person("Thierry Gosselin"), as.person("Louis Bernatchez")),
 url = "https://github.com/thierrygosselin/stackr",
 doi = "http://dx.doi.org/10.5281/zenodo.154432",
-textVersion = paste("Thierry Gosselin, Louis Bernatchez, (2016). stackr: GBS/RAD Data Exploration, Manipulation and Visualization using R. R package version 0.4.3 https://github.com/thierrygosselin/stackr. doi : 10.5281/zenodo.154432")
+textVersion = paste("Thierry Gosselin, Louis Bernatchez, (2016). stackr: GBS/RAD Data Exploration, Manipulation and Visualization using R. R package version 0.4.4 https://github.com/thierrygosselin/stackr. doi : 10.5281/zenodo.154432")
 )