Merge pull request #33 from tcarleton/ci

Add rworkflows CI/CD

.Rbuildignore

@@ -3,3 +3,5 @@
 ^README\.Rmd$
 ^LICENSE\.md$
 ^data-raw$
+^doc$
+^Meta$

.github/workflows/rworkflows.yml

@@ -0,0 +1,57 @@
+name: rworkflows
+'on':
+  push:
+    branches:
+    - master
+    - main
+    - devel
+    - RELEASE_**
+  pull_request:
+    branches:
+    - master
+    - main
+    - devel
+    - RELEASE_**
+jobs:
+  rworkflows:
+    permissions: write-all
+    runs-on: ${{ matrix.config.os }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+    container: ${{ matrix.config.cont }}
+    strategy:
+      fail-fast: ${{ false }}
+      matrix:
+        config:
+      #  - os: ubuntu-latest
+      #    bioc: devel
+      #    r: auto
+      #    cont: ghcr.io/bioconductor/bioconductor_docker:devel
+      #    rspm: ~
+        - os: macOS-latest
+          bioc: release
+          r: auto
+          cont: ~
+          rspm: ~
+        - os: windows-latest
+          bioc: release
+          r: auto
+          cont: ~
+          rspm: ~
+    steps:
+    - uses: neurogenomics/rworkflows@master
+      with:
+        run_bioccheck: ${{ false }}
+        run_rcmdcheck: ${{ true }}
+        as_cran: ${{ true }}
+        run_vignettes: ${{ false }}
+        has_testthat: ${{ true }}
+        run_covr: ${{ true }}
+        run_pkgdown: ${{ true }}
+        has_runit: ${{ false }}
+        has_latex: ${{ false }}
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run_docker: ${{ false }}
+        DOCKER_TOKEN: ${{ secrets.DOCKER_TOKEN }}
+        runner_os: ${{ runner.os }}
+        cache_version: cache-v1
+        docker_registry: ghcr.io

.gitignore

@@ -4,3 +4,5 @@
 .RData
 .Ruserdata
 inst/doc
+/doc/
+/Meta/

DESCRIPTION

@@ -25,7 +25,6 @@ Imports:
     stringr,
     terra
 Suggests: 
-    climateR,
     knitr,
     rmarkdown,
     testthat (>= 3.0.0),

vignettes/data_sources.Rmd

@@ -14,6 +14,7 @@ knitr::opts_chunk$set(
   collapse = TRUE,
   comment = "#>"
 )
+remotes::install_github("mikejohnson51/climateR")
 ```
 
 # Introduction
@@ -48,7 +49,7 @@ gridmet_pr <- climateR::getGridMET(
   varname = "pr",
   startDate = "2010-01-01",
   endDate  = "2010-12-31"
-)[[1]] %>% 
+)[[1]] |>  
   raster::stack()
 ```