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Ionization rates

Ionization rates #5783

Workflow file for this run

# For more information about TARDIS pipelines, please refer to:
#
# https://tardis-sn.github.io/tardis/contributing/development/continuous_integration.html
name: docs
on:
push:
branches:
- master
pull_request_target:
branches:
- master
types:
- opened
- reopened
- synchronize
- labeled # requires the `build-docs` label
- ready_for_review
workflow_dispatch: # manual trigger
env:
CACHE_NUMBER: 0 # increase to reset cache manually
DEPLOY_BRANCH: gh-pages # deployed docs branch
HDF5_USE_FILE_LOCKING: "FALSE" # disable file locking
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash -l {0}
jobs:
check-for-changes:
runs-on: ubuntu-latest
if: ${{ !github.event.pull_request.draft }}
outputs:
trigger-check-outcome: ${{ steps.trigger_check.outcome }}
docs-check-outcome: ${{ steps.docs_check.outcome }}
steps:
- uses: actions/checkout@v4
if: github.event_name != 'pull_request_target'
- name: Checkout pull/${{ github.event.number }}
uses: actions/checkout@v4
with:
fetch-depth: 0
ref: ${{ github.event.pull_request.head.sha }}
if: github.event_name == 'pull_request_target'
- name: Check for trigger by push event, manual dispatch, build-docs label on a PR
id: trigger_check
if: github.event_name == 'push' || github.event_name == 'workflow_dispatch' || github.event_name == 'pull_request_target' && contains(github.event.pull_request.labels.*.name, 'build-docs')
run: |
echo "Building docs as a test."
exit 0
continue-on-error: true
- name: Check for changes in documentation
run: |
if git diff origin/master..."$(git rev-parse --abbrev-ref HEAD)" --name-only | cat | grep '^docs/' | grep -q .; then
num_files=$(git diff --name-only origin/master...HEAD | grep '^docs/' | wc -l)
echo "Changes found in documentation files: $num_files"
exit 0
else
echo "No changes found in documentation files - will stop running the pipeline."
exit 1
fi
id: docs_check
if: steps.trigger_check.outcome != 'success'
continue-on-error: true
build-docs:
runs-on: ubuntu-latest
needs: check-for-changes
if: needs.check-for-changes.outputs.trigger-check-outcome == 'success' || needs.check-for-changes.outputs.docs-check-outcome == 'success'
steps:
- uses: actions/checkout@v4
if: github.event_name != 'pull_request_target'
- name: Checkout pull/${{ github.event.number }}
uses: actions/checkout@v4
with:
fetch-depth: 0
ref: ${{ github.event.pull_request.head.sha }}
if: github.event_name == 'pull_request_target'
- uses: actions/checkout@v4
with:
repository: tardis-sn/tardis-regression-data
path: tardis-regression-data
lfs: true
sparse-checkout: |
atom_data/kurucz_cd23_chianti_H_He.h5
- name: Setup environment
uses: ./.github/actions/setup_env
with:
os-label: linux-64
- name: Copy atom_data
run: |
mkdir -p ~/Downloads/tardis-data && cp -a ./tardis-regression-data/atom_data/. ~/Downloads/tardis-data
- name: Install package
run: pip install -e .
- name: Install Sphinx extensions
run: |
pip install sphinxcontrib-googleanalytics
- name: Build documentation
run: cd docs/ && make html NCORES=auto
- name: Set destination directory
run: |
BRANCH=$(echo ${GITHUB_REF#refs/heads/})
if [[ $EVENT == push ]] || [[ $EVENT == workflow_dispatch ]]; then
if [[ $BRANCH == $DEFAULT ]]; then
echo "DEST_DIR=" >> $GITHUB_ENV
else
echo "DEST_DIR=branch/$BRANCH" >> $GITHUB_ENV
fi
elif [[ $EVENT == pull_request_target ]]; then
echo "DEST_DIR=pull/$PR" >> $GITHUB_ENV
else
echo "Unexpected event trigger $EVENT"
exit 1
fi
cat $GITHUB_ENV
env:
DEFAULT: ${{ github.event.repository.default_branch }}
EVENT: ${{ github.event_name }}
PR: ${{ github.event.number }}
- name: Set clean branch option
run: |
if [[ $EVENT == workflow_dispatch ]]; then
echo "CLEAN_BRANCH=true" >> $GITHUB_ENV
else
echo "CLEAN_BRANCH=false" >> $GITHUB_ENV
fi
cat $GITHUB_ENV
env:
EVENT: ${{ github.event_name }}
- name: Deploy ${{ env.DEST_DIR }}
uses: peaceiris/actions-gh-pages@v4
with:
github_token: ${{ secrets.BOT_TOKEN }}
publish_branch: ${{ env.DEPLOY_BRANCH }}
publish_dir: ./docs/_build/html
destination_dir: ${{ env.DEST_DIR }}
keep_files: true
force_orphan: ${{ env.CLEAN_BRANCH }}
user_name: "TARDIS Bot"
user_email: "[email protected]"
- name: Find comment
uses: peter-evans/find-comment@v1
id: fc
with:
issue-number: ${{ github.event.number }}
body-includes: Hi, human.
if: always() && github.event_name == 'pull_request_target'
- name: Post comment (success)
uses: peter-evans/create-or-update-comment@v1
with:
token: ${{ secrets.BOT_TOKEN }}
issue-number: ${{ github.event.number }}
comment-id: ${{ steps.fc.outputs.comment-id }}
edit-mode: replace
body: |
*\*beep\* \*bop\**
Hi, human.
The **`${{ github.workflow }}`** workflow has **succeeded** :heavy_check_mark:
[**Click here**](${{ env.URL }}) to see your results.
env:
URL: https://${{ github.repository_owner }}.github.io/${{ github.event.repository.name }}/pull/${{ github.event.number }}/index.html
if: success() && github.event_name == 'pull_request_target'
- name: Post comment (failure)
uses: peter-evans/create-or-update-comment@v1
with:
token: ${{ secrets.BOT_TOKEN }}
issue-number: ${{ github.event.number }}
comment-id: ${{ steps.fc.outputs.comment-id }}
edit-mode: replace
body: |
*\*beep\* \*bop\**
Hi, human.
The **`${{ github.workflow }}`** workflow has **failed** :x:
[**Click here**](${{ env.URL }}) to see the build log.
env:
URL: https://github.com/${{ github.repository_owner }}/${{ github.event.repository.name }}/actions/runs/${{ github.run_id }}?check_suite_focus=true
if: failure() && github.event_name == 'pull_request_target'