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Allow h5 seurat for anndata #111

Merged
merged 3 commits into from
Apr 23, 2023
Merged

Allow h5 seurat for anndata #111

merged 3 commits into from
Apr 23, 2023

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stemangiola
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@stemangiola stemangiola merged commit 928e459 into master Apr 23, 2023
@multimeric
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Okay it seems that your changes are:

  • Rename dir_to_anndata to hdf5_to_anndata
  • Added h5seurat_to_anndata, a utility function for converting h5seurat to anndata
  • A lot of miscellaneous changes to the dev/ directory that I don't understand

@multimeric
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I would prefer if you didn't merge if the PR breaks the CI, as it did in this case.

@stemangiola
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Yes I might not have noticed, usually I wait for green.

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@stemangiola @multimeric