CI/CD configured

.gitignore

@@ -1,6 +1,6 @@
-# Created by https://www.toptal.com/developers/gitignore/api/django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++,cmake
-# Edit at https://www.toptal.com/developers/gitignore?templates=django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++,cmake
-baseline/
+# Created by https://www.toptal.com/developers/gitignore/api/django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++
+# Edit at https://www.toptal.com/developers/gitignore?templates=django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++
+baseline/*
 
 ### C ###
 # Prerequisites
@@ -75,23 +75,6 @@ dkms.conf
 
 # Executables
 
-### CMake ###
-CMakeLists.txt.user
-CMakeCache.txt
-CMakeFiles
-CMakeScripts
-Testing
-Makefile
-cmake_install.cmake
-install_manifest.txt
-compile_commands.json
-CTestTestfile.cmake
-_deps
-
-### CMake Patch ###
-# External projects
-*-prefix/
-
 ### Django ###
 *.log
 *.pot
@@ -891,4 +874,4 @@ rsconnect/
 .history
 .ionide
 
-# End of https://www.toptal.com/developers/gitignore/api/django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++,cmake
+# End of https://www.toptal.com/developers/gitignore/api/django,python,pycharm,jupyternotebooks,visualstudiocode,r,macos,latex,c,c++

.travis.yml

@@ -1,21 +1,41 @@
 # Travis CI/CD configuration file
+branches:
+  only:
+    - main
+
+language: python
+python:
+  - "3.9"
+#  - "python-nightly"
+
 before_install:
+  - export CI_BUILD_CPU_ONLY=1
   - curl -sSL https://install.python-poetry.org | python -
-    - export PATH="$HOME/.poetry/bin:$PATH"
+  - export PATH="$HOME/.poetry/bin:$PATH"
+  - cd $TRAVIS_BUILD_DIR && echo $TRAVIS_BUILD_DIR
 
 cache:
   directories:
     - $HOME/.cache/pypoetry
     - $HOME/.cache/pip
 
-language: python
-python:
-  - "3.11"
-
 # command to install dependencies
 install:
   - make install
 
-# command to run tests
-script:
-  - make test
+# Run jobs for CI
+jobs:
+    include:
+      - stage: "Lint"
+        name: "Linting using Ruff"
+        script: make lint
+
+      - stage: "Testing"
+        name: "Unit Testing"
+        script: make test
+#      - stage: "Build"
+#        name: "Build"
+#        script: poetry build
+#      - stage: "Deploy"
+#        name: "Deploy"
+#        script: poetry publish --username $PYPI_USERNAME --password $PYPI_PASSWORD

Makefile

@@ -0,0 +1,33 @@
+# A Makefile that runs the important commands for the project
+# This should include running the tests, linting, and building the project
+.PHONY: test lint install all
+.DEFAULT_GOAL := help
+
+# Run the tests, coverage and coverage badge for the syncombat package
+test:
+	poetry run pytest --cov=syncombat --cov-report=term-missing --mpl-generate-path=baseline tests/
+	poetry run coverage-badge -o badges/coverage.svg -f
+
+# Lint the project
+lint:
+	poetry run ruff check syncombat tests --line-length 120
+
+# Install the project using poetry
+install:
+	poetry install
+
+# Build the project
+all: install lint test
+
+clean-build:
+	rm -rf dist/
+	rm -rf build/
+	find . -name '*.egg-info' -exec rm -rf {} +
+	find . -name '*.egg' -exec rm -rf {} +
+
+
+help:
+	@echo "test - run the tests, coverage and coverage badge for the syncombat package"
+	@echo "lint - lint the project"
+	@echo "install - install the project using poetry"
+	@echo "all - build the project"

README.md

@@ -1,4 +1,5 @@
 # SynComBat
+[![Build Status](https://app.travis-ci.com/sssilvar/syncombat.svg?branch=main)](https://app.travis-ci.com/sssilvar/syncombat)
 ![codecov](badges/coverage.svg)
 
 **SynComBat** is a Python package for generating biased synthetic data following the ComBat model. It provides a framework for generating synthetic datasets with built-in support for introducing biases, incorporating random effects, and applying data transformations.