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Adding ability to pass aligned group to Imagestack.from_path_or_url #1069

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merged 3 commits into from
Mar 20, 2019

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@shanaxel42 shanaxel42 commented Mar 7, 2019

This adds the ability to pass an aligned group when loading an Imagestack from the cli.

closes out (fixes #985)

@shanaxel42 shanaxel42 requested a review from ttung March 7, 2019 18:04
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codecov-io commented Mar 7, 2019

Codecov Report

Merging #1069 into master will increase coverage by <.01%.
The diff coverage is 100%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #1069      +/-   ##
==========================================
+ Coverage   88.82%   88.82%   +<.01%     
==========================================
  Files         167      167              
  Lines        6486     6489       +3     
==========================================
+ Hits         5761     5764       +3     
  Misses        725      725
Impacted Files Coverage Δ
starfish/experiment/experiment.py 82.87% <100%> (-1.5%) ⬇️
starfish/imagestack/imagestack.py 93.82% <100%> (+0.03%) ⬆️
starfish/imagestack/parser/crop.py 92.3% <100%> (+1.13%) ⬆️

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@shanaxel42 shanaxel42 merged commit c2ac47d into master Mar 20, 2019
@shanaxel42 shanaxel42 deleted the saxelrod-cli-aligned-groups branch March 20, 2019 20:19
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FOV Refactor (aka Spiritual Bag of Images Refactor)
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