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installation doc fix
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pdiakumis committed Jun 11, 2024
1 parent 156218f commit cd6a4b8
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions pcgrr/vignettes/installation.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -87,10 +87,10 @@ gzip -dc ${BUNDLE} | tar xvf -
```bash
GENOME="GRCh38" # or "GRCh37"
VEP_VERSION="111"
VEP_VERSION="112"
CACHE="homo_sapiens_vep_${VEP_VERSION}_${GENOME}.tar.gz"
wget https://ftp.ensembl.org/pub/release-111/variation/indexed_vep_cache/${CACHE}
wget https://ftp.ensembl.org/pub/release-${VEP_VERSION}/variation/indexed_vep_cache/${CACHE}
gzip -dc ${CACHE} | tar xvf -
```
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