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sigven committed Jun 26, 2024
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## Personal Cancer Genome Reporter (PCGR) <a href="https://sigven.github.io/pcgr/"><img src="man/figures/logo.png" align="right" height="106" width="90"/></a>
# Personal Cancer Genome Reporter (PCGR) <a href="https://sigven.github.io/pcgr/"><img src="man/figures/logo.png" align="right" height="106" width="90"/></a>


The Personal Cancer Genome Reporter (PCGR) is a stand-alone software package for functional annotation and translation of individual tumor genomes for precision cancer medicine. It interprets primarily somatic SNVs/InDels and copy number aberrations, and has additional support for interpretation of bulk RNA-seq expression data. The software classifies variants both with respect to _oncogenicity_, and _actionability_. Interactive HTML output reports allow the user to interrogate the clinical impact of the molecular findings in an individual tumor.

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