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Merge pull request #230 from sigven/apptainer
Singularity/Apptainer support
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| name: apptainer | ||
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| on: | ||
| push: | ||
| branches: | ||
| - apptainer | ||
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| env: | ||
| VERSION: '1.4.1.9006' # versioned by bump2version | ||
| jobs: | ||
| docker2apptainer: | ||
| name: Docker2apptainer | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| steps: | ||
| - name: Free Disk Space | ||
| uses: jlumbroso/free-disk-space@main | ||
| - name: Check free space | ||
| run: | | ||
| echo "Free space:" | ||
| df -h | ||
| - name: Code checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: v${{ env.VERSION }} | ||
| - name: 🏰 QEMU setup | ||
| uses: docker/setup-qemu-action@v3 | ||
| - name: 🏯 Buildx setup | ||
| uses: docker/setup-buildx-action@v3 | ||
| - name: DockerHub login | ||
| uses: docker/login-action@v3 | ||
| with: | ||
| username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: 🐳 Docker img build and push to DockerHub | ||
| uses: docker/build-push-action@v5 | ||
| with: | ||
| context: . # yes, dot | ||
| push: false | ||
| load: true | ||
| platforms: linux/amd64 | ||
| tags: | | ||
| sigven/pcgr:${{ env.VERSION }} | ||
| - name: Apptainer setup | ||
| uses: eWaterCycle/setup-apptainer@v2 | ||
|
|
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| - name: Apptainer build | ||
| run: | | ||
| docker image ls -a | ||
| docker save sigven/pcgr:${VERSION} -o pcgr_${VERSION}.tar | ||
| ls -la | ||
| df -h | ||
| echo "Building Apptainer SIF" | ||
| echo "---------------------------------" | ||
| apptainer build pcgr_${VERSION}.sif docker-archive://pcgr_${VERSION}.tar | ||
| echo "---------------------------------" | ||
| ls -la | ||
| df -h | ||
| - name: Upload SIF to GHCR | ||
| run: | | ||
| echo ${{ secrets.GITHUB_TOKEN }} | apptainer registry login -u ${{ github.actor }} --password-stdin oras://ghcr.io | ||
| apptainer push pcgr_${VERSION}.sif oras://ghcr.io/${GITHUB_REPOSITORY}:${VERSION} |
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