Bulk publish labels #6530
Workflow file for this run
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name: ci-checks | |
on: | |
pull_request: | |
push: | |
branches: | |
- main | |
schedule: | |
- cron: '30 3 1 */1 *' # At 03:30 on the 1st of every month | |
workflow_dispatch: | |
jobs: | |
backend: | |
name: backend | |
runs-on: ubuntu-22.04 | |
services: | |
postgres: | |
image: postgres:16-alpine | |
env: | |
POSTGRES_USER: hawc | |
POSTGRES_PASSWORD: password | |
POSTGRES_DB: hawc | |
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | |
ports: | |
- 5432:5432 | |
redis: | |
image: redis:6-alpine | |
options: --health-cmd "redis-cli ping" --health-interval 10s --health-timeout 5s --health-retries 5 | |
ports: | |
- 6379:6379 | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.12' | |
architecture: 'x64' | |
- name: Install uv | |
uses: astral-sh/setup-uv@v3 | |
with: | |
enable-cache: true | |
cache-dependency-glob: "**/pyproject.toml" | |
- name: install | |
run: | | |
mv tests/data/ci-webpack-stats.json hawc/webpack-stats.json | |
uv pip install --system -e ".[dev,docs]" | |
uv pip install --system -e client | |
- name: lint-py | |
run: | | |
make lint-py | |
- name: lint-html | |
run: | | |
make lint-html | |
- name: Setup linux environment | |
if: startsWith(runner.os, 'Linux') | |
run: | | |
sudo apt-get update -y | |
sudo apt-get install -y make libgslcblas0 libgsl-dev | |
export "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib" | |
sudo cp vendor/libnlopt.so /usr/local/lib/libnlopt.so.0 | |
sudo ln -s /lib/x86_64-linux-gnu/libgsl.so /usr/local/lib/libgsl.so.25 | |
export SITE_PKG=`python -c "import sysconfig; print(sysconfig.get_path('purelib'))"` | |
export "BMD_DLL=$SITE_PKG/bmds/bin/BMDS330/libDRBMD.so" | |
echo $BMD_DLL | |
ldd $BMD_DLL | |
- name: test | |
env: | |
DJANGO_DB_NAME: hawc | |
DJANGO_DB_USER: hawc | |
DJANGO_DB_PW: password | |
DJANGO_DB_HOST: localhost | |
DJANGO_CACHE_LOCATION: redis://localhost:6379/0 | |
PUBMED_API_KEY: ${{ secrets.PUBMED_API_KEY }} | |
run: | | |
if [ "$RUNNER_OS" == "Linux" ]; then | |
export "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib" | |
fi | |
coverage run -m pytest --record-mode=none | |
echo "# Python coverage report" >> $GITHUB_STEP_SUMMARY | |
coverage report --format=markdown -i >> $GITHUB_STEP_SUMMARY || true | |
coverage html -d coverage -i | |
- name: loc | |
run: | | |
sudo apt-get install -y cloc | |
echo "# Lines of code report" >> $GITHUB_STEP_SUMMARY | |
make loc >> $GITHUB_STEP_SUMMARY | |
- name: Upload Coverage Report | |
uses: actions/upload-artifact@v4 | |
with: | |
name: coverage | |
path: coverage | |
retention-days: 90 | |
frontend: | |
name: frontend | |
runs-on: ubuntu-22.04 | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-node@v4 | |
with: | |
node-version: 22 | |
cache: 'yarn' | |
cache-dependency-path: 'frontend/yarn.lock' | |
- name: install | |
run: | | |
yarn --cwd ./frontend install --frozen-lockfile | |
- name: lint | |
run: | | |
yarn --cwd ./frontend run lint | |
- name: test | |
run: | | |
yarn --cwd ./frontend run test | |
- name: build for integration tests | |
run: | | |
yarn --cwd ./frontend run build | |
- name: Upload webpack build | |
uses: actions/upload-artifact@v4 | |
with: | |
name: webpack | |
path: | | |
hawc/webpack-stats.json | |
hawc/static/bundles/ | |
retention-days: 1 | |
integration: | |
name: integration | |
needs: [backend, frontend] | |
runs-on: ubuntu-22.04 | |
services: | |
postgres: | |
image: postgres:16-alpine | |
env: | |
POSTGRES_USER: hawc | |
POSTGRES_PASSWORD: password | |
POSTGRES_DB: hawc | |
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | |
ports: | |
- 5432:5432 | |
env: | |
DJANGO_DB_HOST: localhost | |
DJANGO_DB_NAME: hawc | |
DJANGO_DB_PW: password | |
DJANGO_DB_USER: hawc | |
INTEGRATION_TESTS: 1 | |
LIVESERVER_HOST: localhost | |
LIVESERVER_PORT: 8000 | |
PUBMED_API_KEY: ${{ secrets.PUBMED_API_KEY }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.12' | |
architecture: 'x64' | |
- name: Install uv | |
uses: astral-sh/setup-uv@v3 | |
with: | |
enable-cache: true | |
cache-dependency-glob: "**/pyproject.toml" | |
- name: Download webpack build | |
uses: actions/download-artifact@v4 | |
with: | |
name: webpack | |
path: hawc | |
- name: install hawc | |
run: | | |
uv sync --all-extras --python-preference=only-system | |
uv run playwright install --with-deps chromium | |
# https://github.community/t/how-to-retry-a-failed-step-in-github-actions-workflow/125880 | |
- name: run integration tests | |
id: test | |
continue-on-error: true | |
run: | | |
uv run py.test -sv tests/integration/ | |
- name: run integration tests (retry) | |
if: steps.test.outcome=='failure' | |
id: retry | |
continue-on-error: true | |
run: | | |
uv run py.test -sv --lf tests/integration/ | |
- name: set status | |
if: always() | |
run: | | |
if ${{ steps.test.outcome=='success' || steps.retry.outcome=='success' }}; then | |
echo success! | |
else | |
exit 1 | |
fi |