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Evaluate segmentation in infer neurons task #8221

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b2d9627
added new inputs for model evaluation
cdfhalle Nov 18, 2024
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run formatter
cdfhalle Nov 20, 2024
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Nov 20, 2024
3258794
updated changelog
cdfhalle Nov 20, 2024
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Merge branch 'evaluate-segmentation-in-infer-neurons-task' of github.…
cdfhalle Nov 20, 2024
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Merge branch 'master' of github.com:scalableminds/webknossos into eva…
cdfhalle Nov 22, 2024
92b6169
add support for displaying annotation links instead of datasets
cdfhalle Nov 26, 2024
67a55ff
Update CHANGELOG.unreleased.md
cdfhalle Nov 26, 2024
63bade2
adapt to feedback
cdfhalle Nov 26, 2024
870b589
Merge branch 'evaluate-segmentation-in-infer-neurons-task' of github.…
cdfhalle Nov 26, 2024
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Nov 27, 2024
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update antd to allow form.field to set its own layout
Nov 29, 2024
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Update frontend/javascripts/admin/api/jobs.ts
cdfhalle Nov 29, 2024
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Merge branch 'master' of github.com:scalableminds/webknossos into eva…
cdfhalle Nov 29, 2024
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Merge branch 'evaluate-segmentation-in-infer-neurons-task' of github.…
cdfhalle Dec 2, 2024
55cd8ac
apply some of the requested changes
cdfhalle Dec 2, 2024
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Merge branch 'master' of github.com:scalableminds/webknossos into eva…
cdfhalle Dec 2, 2024
6055346
yarn fix-frontend
cdfhalle Dec 2, 2024
97cd24c
add assertion for annotationId
cdfhalle Dec 11, 2024
db3e4d1
change variable name in error message
cdfhalle Jan 10, 2025
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Merge branch 'master' of github.com:scalableminds/webknossos into eva…
cdfhalle Jan 10, 2025
213d110
remove changes in application.conf
cdfhalle Jan 10, 2025
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actually undo changes in application.conf
cdfhalle Jan 10, 2025
1a7c1eb
format frontend
cdfhalle Jan 10, 2025
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apply feedback
cdfhalle Jan 16, 2025
7ca5d48
Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 16, 2025
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fix drag handle alignment
Jan 17, 2025
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 20, 2025
9d6572c
Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 20, 2025
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 20, 2025
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 21, 2025
be88173
Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 30, 2025
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle Jan 31, 2025
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Merge branch 'master' into evaluate-segmentation-in-infer-neurons-task
cdfhalle authored Jan 30, 2025
commit be881732ce8b372523abdd2a43d2e3e007742a1e
16 changes: 3 additions & 13 deletions CHANGELOG.unreleased.md
Original file line number Diff line number Diff line change
@@ -12,19 +12,9 @@ For upgrade instructions, please check the [migration guide](MIGRATIONS.released

### Added
- It is now possible to start a split-merger evaluation when starting a neuron inference. [#8221](https://github.com/scalableminds/webknossos/pull/8221)
- When exploring remote URIs pasted from Neuroglancer, the format prefixes like `precomputed://` are now ignored, so users don’t have to remove them. [#8195](https://github.com/scalableminds/webknossos/pull/8195)
- Added the total volume of a dataset to a tooltip in the dataset info tab. [#8229](https://github.com/scalableminds/webknossos/pull/8229)
- Optimized performance of data loading with “fill value“ chunks. [#8271](https://github.com/scalableminds/webknossos/pull/8271)
- Added the option to export a segmentation that was corrected with the proofreading tool to a new segmentation. [#8286](https://github.com/scalableminds/webknossos/pull/8286)
- The fill tool can now be adapted so that it only acts within a specified bounding box. Use the new "Restrict Floodfill" mode for that in the toolbar. [#8267](https://github.com/scalableminds/webknossos/pull/8267)
- Added the option for "Selective Segment Visibility" for segmentation layers. Select this option in the left sidebar to only show segments that are currently active or hovered. [#8281](https://github.com/scalableminds/webknossos/pull/8281)
- A segment can be activated with doubleclick now. [#8281](https://github.com/scalableminds/webknossos/pull/8281)
- It is now possible to select the magnification of the layers on which an AI model will be trained. [#8266](https://github.com/scalableminds/webknossos/pull/8266)
- Added support for translations in OME NGFF zarr datasets (translation within coordinateTransformations on datasets). [#8311](https://github.com/scalableminds/webknossos/pull/8311)
- When the eraser tool is active, one can switch temporarily to the fill-segment tool by pressing shift and ctrl. Only pressing shift, switches to the pick-segment tool. [#8314](https://github.com/scalableminds/webknossos/pull/8314)
- Enabled auto sorting of Typescript imports in Biome linter. [#8313](https://github.com/scalableminds/webknossos/pull/8313)
- Clicking on a segment or tree group will show some details in the details table. [#8316](https://github.com/scalableminds/webknossos/pull/8316)
- Segment and tree names can be edited by doubleclicking them. [#8316](https://github.com/scalableminds/webknossos/pull/8316)
- Added the possibility to configure a rotation for a dataset, which can be toggled off and on when viewing and annotating data. [#8159](https://github.com/scalableminds/webknossos/pull/8159)
- When using the “Restore older Version” feature, there are no longer separate tabs for the different annotation layers. Only one linear annotation history is now used, and if you revert to an older version, all layers are reverted. If layers were added/deleted since then, that is also reverted. This also means that proofreading annotations can now be reverted to older versions as well. The description text of annotations is now versioned as well. [#7917](https://github.com/scalableminds/webknossos/pull/7917)
- Added the possibility to use the "merger mode" even when the user has annotated volume data in the current layer (as long as no other mapping is active). [#8335](https://github.com/scalableminds/webknossos/pull/8335)

### Changed

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