Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support compressed segmentation for Neuroglancer precomputed datasets #6820

Closed
frcroth opened this issue Feb 6, 2023 · 0 comments · Fixed by #6947
Closed

Support compressed segmentation for Neuroglancer precomputed datasets #6820

frcroth opened this issue Feb 6, 2023 · 0 comments · Fixed by #6947

Comments

@frcroth
Copy link
Member

frcroth commented Feb 6, 2023

#6716 does not support compressed segmentation: https://github.com/google/neuroglancer/tree/master/src/neuroglancer/sliceview/compressed_segmentation.

This format is used in all (?) segmentations, so currently segmentations can not be viewed.

There are two implementations: TS (https://github.com/google/neuroglancer/tree/master/src/neuroglancer/sliceview/compressed_segmentation) and C++ (https://github.com/seung-lab/compressedseg) with Python and Go bindings. There is no Java/Scala library.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging a pull request may close this issue.

2 participants