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Read neuroglancer precomputed #6620

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normanrz opened this issue Nov 9, 2022 · 1 comment · Fixed by #6716
Closed

Read neuroglancer precomputed #6620

normanrz opened this issue Nov 9, 2022 · 1 comment · Fixed by #6716

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@normanrz
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normanrz commented Nov 9, 2022

Detailed Description

We already read Zarr and N5. Now, we also want to read Neuroglancer's precomputed for image and segmentation data (no meshes for now).
Here is the specification: https://github.com/google/neuroglancer/blob/master/src/neuroglancer/datasource/precomputed/volume.md

There are 2 flavours that we should support: legacy (single file per chunk) and sharded (multiple chunks per file).
There is also a python implementation in wkconnect that can be reused: https://github.com/scalableminds/webknossos-connect/tree/master/wkconnect/backends/neuroglancer

These neuroglancer formats also need to be "explorable" for users to be able to import them.

@normanrz
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Demo data:
Sharded:

Legacy:

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