Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix incorrect offset into fastq header in name2 mode #1337

Merged
merged 1 commit into from
Sep 28, 2021

Conversation

daviesrob
Copy link
Member

The offset to skip over the first name in the fastq header was being applied twice, potentially causing the search for the comment part to fall off the end of the allocated string.

Thanks to @jmarshall for reporting this.

The offset to skip over the first name in the fastq header
was being applied twice, potentially causing the search for
the comment part to fall off the end of the allocated string.

Thanks to John Marshall for reporting this.
@whitwham whitwham merged commit f05aff6 into samtools:develop Sep 28, 2021
@daviesrob daviesrob deleted the fastq_sra_fix branch September 28, 2021 11:49
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants