Update to new style of dependencies

.gitignore

@@ -4,7 +4,6 @@
 /local
 /logs
 /upstream
-/src/mac-app/build
 
 #############################
 # Autotools generated files #
@@ -75,4 +74,10 @@ $RECYCLE.BIN/
 #################
 *.sage-chat
 *.sage-history
-*.syncdoc*
+*.syncdoc*
+
+###########
+# Jupyter #
+###########
+.ipynb_checkpoints
+Untitled*.ipynb

COPYING.txt

@@ -28,6 +28,7 @@ the licenses of the components of Sage are included below as well.
 
 SOFTWARE                    LICENSE
 -----------------------------------------------------------------------
+arb                         GPLv2+
 atlas                       Modified BSD
 boehm_gc                    MIT-like license (see below)
 backports_ssl_match_hostname  Python License
@@ -88,6 +89,7 @@ mpmath                      Modified BSD
 networkx                    Modified BSD
 ntl                         GPLv2+
 numpy                       Modified BSD
+openblas                    Modified BSD
 palp                        GPLv3
 pari                        GPLv2+
 patch                       GPLv2+

Makefile

@@ -13,13 +13,14 @@ build: all-build
 
 # Defer unknown targets to build/make/Makefile
 %::
+	@if [ -x relocate-once.py ]; then ./relocate-once.py; fi
 	$(MAKE) build/make/Makefile
 	+build/bin/sage-logger \
 		"cd build/make && ./install '$@'" logs/install.log
 
 # If configure was run before, rerun it with the old arguments.
 # Otherwise, run configure with argument $PREREQ_OPTIONS.
-build/make/Makefile: configure
+build/make/Makefile: configure build/make/deps build/pkgs/*/*
 	rm -f config.log
 	mkdir -p logs/pkgs
 	ln -s logs/pkgs/config.log config.log
@@ -42,6 +43,9 @@ download:
 	export PATH=$$SAGE_ROOT/src/bin:$$PATH && \
 	./src/bin/sage-download-upstream
 
+dist: build/make/Makefile
+	./sage --sdist
+
 # ssl: build Sage, and also install pyOpenSSL. This is necessary for
 # running the secure notebook. This make target requires internet
 # access. Note that this requires that your system have OpenSSL
@@ -90,56 +94,48 @@ test: all
 check: test
 
 testall: all
-	$(TESTALL) --optional=all --logfile=logs/testall.log
+	$(TESTALL) --optional=sage,optional,external --logfile=logs/testall.log
 
 testlong: all
 	$(TESTALL) --long --logfile=logs/testlong.log
 
 testalllong: all
-	$(TESTALL) --long --optional=all --logfile=logs/testalllong.log
+	$(TESTALL) --long --optional=sage,optional,external --logfile=logs/testalllong.log
 
 ptest: all
 	$(PTESTALL) --logfile=logs/ptest.log
 
 ptestall: all
-	$(PTESTALL) --optional=all --logfile=logs/ptestall.log
+	$(PTESTALL) --optional=sage,optional,external --logfile=logs/ptestall.log
 
 ptestlong: all
 	$(PTESTALL) --long --logfile=logs/ptestlong.log
 
 ptestalllong: all
-	$(PTESTALL) --long --optional=all --logfile=logs/ptestalllong.log
-
+	$(PTESTALL) --long --optional=sage,optional,external --logfile=logs/ptestalllong.log
 
-testoptional: testall # just an alias
+testoptional: all
+	$(TESTALL) --optional=sage,optional --logfile=logs/testoptional.log
 
-testoptionallong: testalllong # just an alias
+testoptionallong: all
+	$(TESTALL) --long --optional=sage,optional --logfile=logs/testoptionallong.log
 
-ptestoptional: ptestall # just an alias
+ptestoptional: all
+	$(PTESTALL) --optional=sage,optional --logfile=logs/ptestoptional.log
 
-ptestoptionallong: ptestalllong # just an alias
+ptestoptionallong: all
+	$(PTESTALL) --long --optional=sage,optional --logfile=logs/ptestoptionallong.log
 
-configure: configure.ac src/bin/sage-version.sh \
-        m4/ax_c_check_flag.m4 m4/ax_gcc_option.m4 m4/ax_gcc_version.m4 m4/ax_gxx_option.m4 m4/ax_gxx_version.m4 m4/ax_prog_perl_version.m4
+configure: configure.ac src/bin/sage-version.sh m4/*.m4
 	./bootstrap -d
 
 install:
-	echo "Experimental use only!"
-	if [ "$(DESTDIR)" = "" ]; then \
-		echo >&2 "Set the environment variable DESTDIR to the install path."; \
-		exit 1; \
-	fi
-	# Make sure we remove only an existing directory. If $(DESTDIR)/sage is
-	# a file instead of a directory then the mkdir statement later will fail
-	if [ -d "$(DESTDIR)"/sage ]; then \
-		rm -rf "$(DESTDIR)"/sage; \
-	fi
-	mkdir -p "$(DESTDIR)"/sage
-	mkdir -p "$(DESTDIR)"/bin
-	cp -Rp * "$(DESTDIR)"/sage
-	rm -f "$(DESTDIR)"/bin/sage
-	ln -s ../sage/sage "$(DESTDIR)"/bin/sage
-	"$(DESTDIR)"/bin/sage -c # Run sage-location
+	@echo "******************************************************************"
+	@echo "The '$@' target is no longer supported:"
+	@echo "either build SageMath in-place or use the binary packaging scripts"
+	@echo "from https://github.com/sagemath/binary-pkg"
+	@echo "******************************************************************"
+	@exit 1
 
 
 .PHONY: default build install micro_release \