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rpetit3 committed Aug 22, 2022
1 parent b93b001 commit 5aaa866
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2 changes: 1 addition & 1 deletion bin/pbptyper
Original file line number Diff line number Diff line change
Expand Up @@ -6,13 +6,13 @@ from rich.console import Console
from rich.table import Table
import rich_click as click

VERSION = '1.0.1'
DB_PATH = str(Path( __file__ ).parent.absolute()).replace("bin", "db")
DB_FASTAS = {
"1A": "SPN_bLactam_1A-DB.faa",
"2B": "SPN_bLactam_2B-DB.faa",
"2X": "SPN_bLactam_2X-DB.faa"
}
VERSION = '1.0.0'
TBLASTN_COLS = [
"qseqid", "sseqid", "pident", "qcovs", "qlen", "slen", "length", "nident", "mismatch",
"gapopen", "qstart", "qend", "sstart", "send", "evalue", "bitscore", "qseq", "sseq"
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