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Add tracing to Trees and Deep Subtrees #18

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merged 64 commits into from
Dec 7, 2022

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Manav-Aggarwal
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@Manav-Aggarwal Manav-Aggarwal commented Nov 27, 2022

Overview

Closes: #19
Closes: #20
Closes: #21
Closes: #22

Checklist

  • New and updated code has appropriate documentation
  • New and updated code has new and/or updated testing
  • Required CI checks are passing
  • Visual proof for any user facing features like CLI or documentation updates
  • Linked issues closed with keywords

@Manav-Aggarwal Manav-Aggarwal force-pushed the manav/new_iavl_design branch 2 times, most recently from 7d1bb41 to 3bb08cb Compare December 1, 2022 20:03
@Manav-Aggarwal Manav-Aggarwal changed the title New IAVL Design Add tracing to Trees and Deep Subtrees Dec 1, 2022
@Manav-Aggarwal Manav-Aggarwal marked this pull request as ready for review December 1, 2022 20:06
@Manav-Aggarwal Manav-Aggarwal self-assigned this Dec 1, 2022
@Manav-Aggarwal Manav-Aggarwal linked an issue Dec 1, 2022 that may be closed by this pull request
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@tzdybal tzdybal left a comment

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Looks good. I left small comment regarding error message.

deepsubtree.go Show resolved Hide resolved
deepsubtree.go Outdated Show resolved Hide resolved
deepsubtree_test.go Show resolved Hide resolved
mutable_tree.go Outdated Show resolved Hide resolved
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LGTM

@Manav-Aggarwal Manav-Aggarwal merged commit e41b308 into deepsubtrees Dec 7, 2022
Manav-Aggarwal added a commit that referenced this pull request Dec 20, 2022
* Add go fuzz tests

* Add membership proof for existing keys

* Build tree after adding membership proof

* Make batch add fuzz tests work

* Do not commit version twice for dst

* Save version out of dst.Set condition

* Set rootHash to workingHash

* Fix edge cases

* Refactor DST Non-Existence Proof

* Change cacheSize

* Add test data and sibling nodes for each node in path

* Fix GetSiblingNodes

* Add more test data

* testing: fuzz: failing test case

* Use set for keys

* Add more test data

* Refactor existence proofs code

* Add required info for remove operation

* Add children of siblings as well

* Remove debug code

* Add testdata that breaks current code

* Fix bug

* Add failing testcase

* Add breaking testcase

* IAVL with tracing

* Fuzz tests pass

* Refactor tracing code

* Remove redundant code

* Remove working hash in calls to AddExistenceProof

* Clean up flag

* Make build tree a private method

* Add back whitespace in node.go

* Add new ci for fuzz

* Refactor more

* Refactor out getKey method

* Change name to reapInclusionProofs

* Refactor set and remove in DST

* Factor out add existence proofs from Remove DST for consistency with Set

* Refactor into testContext

* Clean up setInDST

* Add method for get

* Export methods

* Add witness data to deep subtree

* Verify operation in witness data

* Refactor and verify operation for get and remove

* Add set witness data

* Add tracing to tree

* add getter for witness data

* Verify existence proofs in dst

* Cleanup

* Reset witness data on tracing enabled

* Add node to keysAccessed even not in cache

* Add initial root hash

* Refactor GetInitialRootHash

* Modify GetInitialRootHash

* Add test data

* Add get to dst tests: fails right now

* Refactor and add tracing for root key as well

* Add docs

* Add more docs

* Update comments

* Update log message

Co-authored-by: Tomasz Zdybał <[email protected]>

* allocate length

Co-authored-by: Tomasz Zdybał <[email protected]>
Manav-Aggarwal added a commit that referenced this pull request Dec 20, 2022
* Add go fuzz tests

* Add membership proof for existing keys

* Build tree after adding membership proof

* Make batch add fuzz tests work

* Do not commit version twice for dst

* Save version out of dst.Set condition

* Set rootHash to workingHash

* Fix edge cases

* Refactor DST Non-Existence Proof

* Change cacheSize

* Add test data and sibling nodes for each node in path

* Fix GetSiblingNodes

* Add more test data

* testing: fuzz: failing test case

* Use set for keys

* Add more test data

* Refactor existence proofs code

* Add required info for remove operation

* Add children of siblings as well

* Remove debug code

* Add testdata that breaks current code

* Fix bug

* Add failing testcase

* Add breaking testcase

* IAVL with tracing

* Fuzz tests pass

* Refactor tracing code

* Remove redundant code

* Remove working hash in calls to AddExistenceProof

* Clean up flag

* Make build tree a private method

* Add back whitespace in node.go

* Add new ci for fuzz

* Refactor more

* Refactor out getKey method

* Change name to reapInclusionProofs

* Refactor set and remove in DST

* Factor out add existence proofs from Remove DST for consistency with Set

* Refactor into testContext

* Clean up setInDST

* Add method for get

* Export methods

* Add witness data to deep subtree

* Verify operation in witness data

* Refactor and verify operation for get and remove

* Add set witness data

* Add tracing to tree

* add getter for witness data

* Verify existence proofs in dst

* Cleanup

* Reset witness data on tracing enabled

* Add node to keysAccessed even not in cache

* Add initial root hash

* Refactor GetInitialRootHash

* Modify GetInitialRootHash

* Add test data

* Add get to dst tests: fails right now

* Refactor and add tracing for root key as well

* Add docs

* Add more docs

* Update comments

* Update log message

Co-authored-by: Tomasz Zdybał <[email protected]>

* allocate length

Co-authored-by: Tomasz Zdybał <[email protected]>
Manav-Aggarwal added a commit that referenced this pull request Jan 18, 2023
* feat: Deep tree structure with Updates (#13)

* ICS23-style approach for DeepSubTree creation

* Fix deepsubtree, all checks pass

* Update documentation for deep subtrees

* Fix deepsubtree to accomodate left/right paths both

* Refactor test code

* Refactor TestDeepSubtreeStepByStep

* Address comments

* Refactor code

* Disable gocritic and unused

* Add description

* Refactor code to check err in Set

* Modify traversal conditions to be clearer

* feat: build deep subtree from ICS23 inclusion proofs (#9)

* feat: build deep subtree from ICS23 inclusion proofs

* feat: handle non-existence proofs

* linter: goimports deepsubtree.go

* refactor: addExistenceProofProof -> addExistenceProof

* fix: un-hardcode size of byte array

* Add more comments

* Refactor ndb.Commit call outside for loop

* verify that in the case that dst.root != nil that the root node hash matches the provided hash and check dst.root != nil first

* Add strings and use strings.Repeat

* Delete addPath and AddPath

* Remove print statements

* Refactor recomputeHash usage

Co-authored-by: Matthew Sevey <[email protected]>

* return err directly

Co-authored-by: Matthew Sevey <[email protected]>

* Address linting checks

* Use tm-db instead of cosmos-db

* Fix linter

* Update comment

Co-authored-by: Matthew Sevey <[email protected]>

* Add error checking for node hash

* turn lengthByte into a const

* Refactor linkNode

* Update comment

Co-authored-by: Tomasz Zdybał <[email protected]>
Co-authored-by: Matthew Sevey <[email protected]>

* feat: Support Adds in a Deep Subtree (#8)

* ICS23-style approach for DeepSubTree creation

* Fix deepsubtree, all checks pass

* Update documentation for deep subtrees

* Fix deepsubtree to accomodate left/right paths both

* Refactor test code

* Refactor TestDeepSubtreeStepByStep

* Address comments

* Refactor code

* Disable gocritic and unused

* Add description

* Refactor code to check err in Set

* Modify traversal conditions to be clearer

* feat: build deep subtree from ICS23 inclusion proofs (#9)

* feat: build deep subtree from ICS23 inclusion proofs

* feat: handle non-existence proofs

* linter: goimports deepsubtree.go

* refactor: addExistenceProofProof -> addExistenceProof

* fix: un-hardcode size of byte array

* Add more comments

* Refactor ndb.Commit call outside for loop

* verify that in the case that dst.root != nil that the root node hash matches the provided hash and check dst.root != nil first

* Add strings and use strings.Repeat

* Delete addPath and AddPath

* Remove print statements

* Refactor recomputeHash usage

Co-authored-by: Matthew Sevey <[email protected]>

* return err directly

Co-authored-by: Matthew Sevey <[email protected]>

* Address linting checks

* Use tm-db instead of cosmos-db

* Fix linter

* Add test to check add operation in deepsubtree: WIP

* Add insert key functionality WIP

* Try replicating non-inclusion proofs

* Add sibling nodes to nonExistenceProofs

* Refactor test code

* Finish adding add functionality to dst

* Add Remove functionality to dst

* Fix linting errors

* Fix GetSiblingNode

* Remove more print statements

* Add comment for each case in recursive set

* Change which methods are exported and document exported methods

* feat: Support Empty Hashes and Add constructor (#11)

* Export siblings

* Add deepsubtree constructor

* Support empty root hashes

* Use working hash instead of root.hash

* Use tm-db instead of cosmos-db

* Return nil in BuildTree

* Address comments

* Address more comments

Co-authored-by: Tomasz Zdybał <[email protected]>
Co-authored-by: Matthew Sevey <[email protected]>

* Add randomized tests for adding/removing keys (#16)

* Add go fuzz tests

* Add membership proof for existing keys

* Build tree after adding membership proof

* Make batch add fuzz tests work

* Do not commit version twice for dst

* Save version out of dst.Set condition

* Set rootHash to workingHash

* Fix edge cases

* Refactor DST Non-Existence Proof

* Change cacheSize

* Add test data and sibling nodes for each node in path

* Fix GetSiblingNodes

* Add more test data

* testing: fuzz: failing test case

* Use set for keys

* Add more test data

* Refactor existence proofs code

* Add required info for remove operation

* Add children of siblings as well

* Remove debug code

* Add testdata that breaks current code

* Fix bug

* Add failing testcase

* Add breaking testcase

* IAVL with tracing

* Fuzz tests pass

* Refactor tracing code

* Remove redundant code

* Remove working hash in calls to AddExistenceProof

* Clean up flag

* Make build tree a private method

* Add back whitespace in node.go

* Add new ci for fuzz

* Refactor more

* Refactor out getKey method

* Change name to reapInclusionProofs

* Refactor set and remove in DST

* Factor out add existence proofs from Remove DST for consistency with Set

* Refactor into testContext

* Clean up setInDST

Co-authored-by: Tomasz Zdybał <[email protected]>

* Add tracing to Trees and Deep Subtrees (#18)

* Add go fuzz tests

* Add membership proof for existing keys

* Build tree after adding membership proof

* Make batch add fuzz tests work

* Do not commit version twice for dst

* Save version out of dst.Set condition

* Set rootHash to workingHash

* Fix edge cases

* Refactor DST Non-Existence Proof

* Change cacheSize

* Add test data and sibling nodes for each node in path

* Fix GetSiblingNodes

* Add more test data

* testing: fuzz: failing test case

* Use set for keys

* Add more test data

* Refactor existence proofs code

* Add required info for remove operation

* Add children of siblings as well

* Remove debug code

* Add testdata that breaks current code

* Fix bug

* Add failing testcase

* Add breaking testcase

* IAVL with tracing

* Fuzz tests pass

* Refactor tracing code

* Remove redundant code

* Remove working hash in calls to AddExistenceProof

* Clean up flag

* Make build tree a private method

* Add back whitespace in node.go

* Add new ci for fuzz

* Refactor more

* Refactor out getKey method

* Change name to reapInclusionProofs

* Refactor set and remove in DST

* Factor out add existence proofs from Remove DST for consistency with Set

* Refactor into testContext

* Clean up setInDST

* Add method for get

* Export methods

* Add witness data to deep subtree

* Verify operation in witness data

* Refactor and verify operation for get and remove

* Add set witness data

* Add tracing to tree

* add getter for witness data

* Verify existence proofs in dst

* Cleanup

* Reset witness data on tracing enabled

* Add node to keysAccessed even not in cache

* Add initial root hash

* Refactor GetInitialRootHash

* Modify GetInitialRootHash

* Add test data

* Add get to dst tests: fails right now

* Refactor and add tracing for root key as well

* Add docs

* Add more docs

* Update comments

* Update log message

Co-authored-by: Tomasz Zdybał <[email protected]>

* allocate length

Co-authored-by: Tomasz Zdybał <[email protected]>

* fix: remove `RangeProofs` (cosmos#586)

Co-authored-by: colin axnér <[email protected]>
Co-authored-by: Marko <[email protected]>

* Update go.mod file

* Add new line at end of .golangci.yml

Co-authored-by: Tomasz Zdybał <[email protected]>
Co-authored-by: Matthew Sevey <[email protected]>
Co-authored-by: cool-developer <[email protected]>
Co-authored-by: colin axnér <[email protected]>
Co-authored-by: Marko <[email protected]>
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