clean up unused functions

rnabioco · Jan 7, 2020 · 95981df · 95981df
1 parent 16e3243
commit 95981df
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Showing 12 changed files with 5 additions and 232 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -16,7 +16,6 @@ S3method(seurat_meta,seurat)
 S3method(seurat_ref,Seurat)
 S3method(seurat_ref,seurat)
 export(average_clusters)
-export(average_clusters_filter)
 export(binarize_expr)
 export(calculate_pathway_gsea)
 export(call_consensus)
@@ -38,15 +37,13 @@ export(gene_pct_markerm)
 export(get_vargenes)
 export(gmt_to_list)
 export(insert_meta_object)
-export(make_comb_ref)
 export(marker_select)
 export(matrixize_markers)
 export(object_ref)
 export(overcluster)
 export(overcluster_test)
 export(parse_loc_object)
 export(plot_best_call)
-export(plot_cols)
 export(plot_cor)
 export(plot_cor_heatmap)
 export(plot_dims)

diff --git a/R/compute_similarity.R.REMOVED.git-id b/R/compute_similarity.R.REMOVED.git-id
@@ -1 +1 @@
-e158bc0a2e5ca6c5a584e9ccb87a6a96ec91ffc4
+a47e09e0d25dac5310ae44a3351c100c21edd6ae
diff --git a/R/plot.R.REMOVED.git-id b/R/plot.R.REMOVED.git-id
@@ -1 +1 @@
-97529b93e40b878045d2e11284532e37db8fa8fc
+f70b7643b940cce1061d7f6cc5a350019c25e29f
diff --git a/R/utils.R.REMOVED.git-id b/R/utils.R.REMOVED.git-id
@@ -1 +1 @@
-e33a670c61e5453863d95a6478818138bb28d0c6
+2c37236168b5691258c64d82367c72a85d96eae3
diff --git a/man/RowVar.Rd b/man/RowVar.Rd
diff --git a/man/average_clusters_filter.Rd b/man/average_clusters_filter.Rd
diff --git a/man/clustify_intra.Rd b/man/clustify_intra.Rd
diff --git a/man/compute_mean_expr.Rd b/man/compute_mean_expr.Rd
diff --git a/man/make_comb_ref.Rd b/man/make_comb_ref.Rd
diff --git a/man/plot_cols.Rd b/man/plot_cols.Rd
diff --git a/tests/testthat/test_plots.R.REMOVED.git-id b/tests/testthat/test_plots.R.REMOVED.git-id
@@ -1 +1 @@
-5b199a209843244996482773e965af1738f030b5
+7c739658e323fd24491749f1f26dbcdc832b7075
diff --git a/tests/testthat/test_utils.R.REMOVED.git-id b/tests/testthat/test_utils.R.REMOVED.git-id
@@ -1 +1 @@
-0a1373125ad8ffe79f54cb0a0ee7cee9c33adde7
+5ec1b9ac2ffeccd1b5f3c7de7403047fd2b83e10
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