plddt and Pae plots #116
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| name: Python package | |
| on: | |
| push: | |
| branches: [ "**" ] | |
| pull_request: | |
| branches: [ "**" ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pre-commit coverage | |
| if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
| python -m pip install . | |
| - name: Run pre-commit hooks | |
| run: | | |
| pre-commit run --all-files | |
| - name: Test with coverage | |
| run: | | |
| coverage run --source=abcfold --module pytest --verbose tests && coverage report --show-missing | |
| - name: Generate coverage badge | |
| run: | | |
| pip install coverage-badge | |
| coverage-badge -o .blob/coverage.svg -f | |
| - name: Upload coverage badge | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-badge | |
| path: coverage.svg |