plddt and Pae plots #107
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Python package | |
| on: | |
| push: | |
| branches: [ "**" ] | |
| pull_request: | |
| branches: [ "**" ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pre-commit coverage | |
| if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
| python -m pip install . | |
| - name: Run pre-commit hooks | |
| run: | | |
| pre-commit run --all-files | |
| - name: Test with coverage | |
| run: | | |
| coverage run --source=abcfold --module pytest --verbose tests && coverage report --show-missing | |
| - name: Generate coverage badge | |
| run: | | |
| pip install coverage-badge | |
| coverage-badge -o .blob/coverage.svg -f | |
| - name: Upload coverage badge | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-badge | |
| path: coverage.svg |